List of In-silico Binding Site Prediction Tools
...o forms from more than 40,000 structures. To identify protein binding...: http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi is the NCBI Inf...fully automated approach for structure based function prediction usi...g sites matching your protein structure or inversely, for finding pro...3741 days ago
Apps for Busy Bioinformatics Researchers !!!
.... The impact of each SAAS on protein function is predicted using the SNAP and SIFT algorithms and augmented with experimentally derived function/structure information and disease assoc...3539 days ago
Binding Site Prediction in Protein !
...protein surface and tools for predicting the structure of the intermolecular complex...fication of pockets and cavities in proteins structure, and quantitation of their vo...andSite The server utilizes protein-structure prediction to provide structu...2199 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...up at UCSC studying using ion channels for analysis of single RNA/DNA structures) software pipeline; tailored...iance explained by the SNPs, estimation of the linkage disequilibrium structure, and GWAS simulation”...2906 days ago
Genome Assembly Tools and Software - PART1 !!
...ly formatted to specific data structure. Currently, existing data structure for this usage can be predomi...ies an align-layout-consensus structure, consisting of three major st...l approach to reconstruct the structure of a viral quasispecies from...2683 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...a common ancestor that also possessed that feature. homology -- Two structures are considered homologous when they are inherited from a common ancestor which possessed the structure. This may be difficult to det...2459 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated increasing interest in deve...2271 days ago
Tools to Predict the Impact of Missense Variants !
...tools are useful for mis sense muation detection ... PolyPhen‐2 (PP2)“Predicts possible impact of an amino acid substitution on the structure and function of a human prote...2200 days ago
Protein-Protein Interaction Sites Predictions !
...g protein pairs and interacting sites by homology modeling of complex structures HotPOINT Prediction of pro...od for the prediction of DNA-protein interactions DISPLAR Given the structure of a protein known to bind DN...2199 days ago
Tools for Protein-Protein Docking !
Predicting the structure of protein–protein complexes using dockin...es. Following are the tools to predict the structure of protein–protein comp...earch: Monte Carlo with low and high resolution structure representation levels Differ...2199 days ago