2336 days ago
Synima: a Synteny imaging tool for annotated genome assemblies
Synima written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciproc...of these programs are included with the Synima package, and a pipeline for t...onfig file generated by the first run of Synima – and can be subsequent...2012 days ago
Tags: Synima, Synteny, Imaging, tool
2336 days ago
Synima: a Synteny imaging tool for annotated genome assemblies
Synima written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciprocal best BLAST hits or OrthoMCL, and DAGchainer, and outputs an overview of genome-wide synteny in PDF. Each of these programs are included with the Synima package, and a pipeline for the...Tags: Synima, Synteny, imaging, tool, annotated, genome, assemblies
2012 days ago