NCBI Prokaryotic Genome Annotation Pipeline
...other mobile elements. NCBI has developed an automatic prokaryotic genome annotation pipeline that combines ab initio gene prediction algorithms with homology based methods....2539 days ago
Genome Annotation Transfer Utility (GATU)
...annotated strain of SARS CoV. This saves researchers from tedious manual annotation of these sequences. The program utilizes tBLASTn and BLASTn algorithms to map genes from the referen...2526 days ago
CoreTracker, a codon reassignment tracker
CoreTracker detects evidences of codon reassignment from the protein repertoire of a set of genomes by successively applying different algorithms. It’s a filtering approach that e...2495 days ago
MOSS: A System for Detecting Software Similarity
...lopment in 1994, Moss has been very effective in this role. The algorithm behind moss is a significant improvement over other cheating detection algorithms (at least, over those known t...2332 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide sequences of different...2469 days ago
2342 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique software...2340 days ago
ACANA: An accurate and consistent alignment tool for DNA sequences
...y conserved regions and/or have a high frequency of long insertions or deletions. It attempts to combine the best of local and global alignments algorithms in searching for evolutionari...2335 days ago
FOGSAA: Fast Optimal Global Sequence Alignment Algorithm
Sequence alignment algorithms are widely used to infer similarirty and the point of differences between pair of sequences. FOGSAA is a fast Global alignment algorithm. It is basic...2333 days ago
TeachEnG: Teaching Engine for Genomics
...rstand key bioinformatics concepts. The current version includes interactive modules for sequence alignment and phylogenetic tree reconstruction algorithms, with accompanying video tuto...2328 days ago