Tags: Bioinformatics, Analysis, Assembly, Genome, Chromosome, Plot, Phenome
2616 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, COCACOLA, MetaGenomics, Contamination
2616 days ago
GroopM: Metagenomic binning toolset
GroopM is a metagenomic binning toolset. It leverages spatio-temoraldynamics (differential coverage) to accurately (and almost automatically)extract population genomes from multi-sample metagenomic datasets. GroopM is largely parameter-free. Use: groopm -h for more info. For installation and us...Tags: Bioinformatics, Analysis, Assembly, Genome, GroopM, Metagenome, Binning
2616 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can change the pipeline or fine-tune the parameters by modifying its configuration file. SeqMule also has some built-in...Tags: Bioinformatics, Analysis, Assembly, Genome, SeqMule, Exome, Structure, Variation
2616 days ago
Tags: Bioinformatics, Analysis, BLAST, sequenceserver
2613 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, Multigenome, Metagenome, Filter
2609 days ago
Tags: Bioinformatics, Analysis, Format, JSON
2588 days ago
Tags: Bioinformatics, Analysis, Plot, UpSetR, Shiny, App, R
2578 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, PacBio, Long, DBG2OLC
2573 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and down...Tags: Bioinformatics, Analysis, Enrichment, Enrichr, Web, Server, GO, Pathway, Genes, BED, Ontologies, Drug, Cell, Disease
2565 days ago