2640 days ago
Comment on "List of gene ontology software and tools"
...measure provides a competitive method with robust performance for quantification of semantic similarity between genes and proteins based on GO annotations. An R script for TopoICSim is...2837 days ago
Comment on "List of gene ontology software and tools"
Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.2979 days ago
Comment on "R and Bioconductor Tutorial"
...ifferentially expressed genes from RNA-Seq data. [4] IRanges – infrastructure for positional data. biomaRt – interface to BioMart annotations. rtracklayer – interfa...3675 days ago
3814 days ago