BOL: Results for "assemblytics"

Results for "assemblytics"

- Jit@jit.aber
assemblytics: delta file to analyze alignments of an assembly to another assembly or a reference genome
Download and install MUMmer Align your assembly to a reference genome using nucmer (from MUMmer package) $ nucmer -maxmatch -l 100 -c 500 REFERENCE.fa ASSEMBLY.fa -prefix OUT Consult the MUMmer manual if you encounter problems Optional: Gzip the delta file to speed up upload (usually 2-4X f...
Tags: assemblytics, delta, analyze, alignment, assembly, reference, genome, visualization
2150 days ago
- Jit@jit.aber
http://qb.cshl.edu/assemblytics/ #Analysis #Genome #Mummer #Assembly #Assemblytics
Tags: Analysis, Genome, Mummer, Assembly, Assemblytics
2121 days ago