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Results for "blasr"

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• • Jit@jit.aber

  

  BlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR): Theory and Application,

  BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion error. Here is how I use the blasr to align PacBio rea...

  Tags: Mapping, single, molecule, sequencing, reads, Basic, Local, Alignment, Successive, Refinement, BLASR

  2166 days ago

• • Jit@jit.aber

  

  Download blasr 1.3 version

  DOWNLOAD LINK: https://github.com/BioInf-Wuerzburg/proovread/raw/master/util/blasr-1.3.1/blasr I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following error: fail to open file './temporarySam' [bwa_aln_core] write to the disk... 0.09 sec[bwa_aln_core] 70778880 sequences ha...

  Tags: blasr, download, scaffolder, OPERA-LG, temporarySam, genome, contigs

  2144 days ago