Results for "browsers"
Bookmarks
...(miRNA) expression profiles and cluster reads using one of several algorithm. MIRO output is furthermore compatible with software such as genome browsers and miRDeep....2774 days ago
- ...of the information in read-to-reference or genome-genome alignments is lost for structural variations in the one-dimensional views of most genome browsers showing only reference coordi...
2758 days ago
- +9 more Bookmarks
Top-level pages
- ...retreiving sequences and annotation of genomes belong to various eukaryotes, prokaryotes, etc. Following are the weblink for different available browsers: http://www.ensembl.org/inde...
3919 days ago
Next generation sequencing in R or bioconductor environment
...s an interface for exporting annotation feature data to various genome browsers and file formats (such as GFF...C: Flow Cell Quality Visualization rtracklayer: R interface to genome browsers genoPlotR: Plotting maps of...3629 days ago
- +2 more Top-level pages
News
ArrayGen Next Generation Genome Browser Coming Soon !!!
...to use. The main features are, it supports many standard file formats such as GFF, BED, GTF, FASTA, VCF, BAM and it can be integrated with other browsers or tools for analysis of geno...3081 days ago
Opportunity posts
Post doc in Computational Genetics and Genomics at CEINGE Biotecnologie Avanzate, Naples, Italy
...s will have some expertise in data analysis of NGS data by using methods running in R and UNIX environment. Familiarity with genome databases and browsers is required. Application...3741 days ago
- ...g the assembled genome and geneet testing and their validation 8. Metabolic pathway analysis 9. Comparative genomics 10. Setting up of genome browsers. Period of Assigment : Ini...
3648 days ago
Tags
Bokeh: An interactive visualization library that targets modern web browsers for presentation
Bokeh is an interactive visualization library that targets modern web browsers for presentation. Its goal is to provide elegant, concise construction of versatile graphics, and to extend this capability with high-performance interactivity over very large or streaming datasets. Bokeh can help anyo...Tags: Bokeh, interactive, visualization, library, targets, modern, web, browsers, presentation
2099 days ago
Comments
- ...mity. The input can be SAM, BAM, FASTA, BED files or Chromosome size file (two-column, plain text file). Visualization can be performed by genome browsers like UCSC, IGB and IGV. Howev...
2142 days ago
Comment on "R and Bioconductor Tutorial"
...infrastructure for positional data. biomaRt – interface to BioMart annotations. rtracklayer – interface to online and other genome browsers. chipseq & ChIPpeakAnno...3675 days ago
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