List of In-silico Binding Site Prediction Tools
...proteins such as Kinases and the conserved structural features of their...For example, it can highlight a conserved activation loop common to pro...xes and recognition of spatially conserved physico-chemical properties i...ares it with a set of 215 highly conserved structural motifs known to bi...3752 days ago
Next generation sequencing in R or bioconductor environment
...etrieve the sequences around peaks, obtain enriched Gene Ontology (GO) terms, find the nearest gene, exon, miRNA or custom features such as most conserved elements and other transcript...3633 days ago
Binding Site Prediction in Protein !
...Identification protein interaction sites. It uses sequence conservation patterns in homologous proteins to distinguish between residues that are conserved due to structural restraints...2210 days ago
Genome Assembly Tools and Software - PART1 !!
...h can assemble select regions surrounding interesting features in metagenomic data. The software is particularly useful for very common and well-conserved genes (and – in theory...2694 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...he taxa under consideration, is used to infer common ancestry (shared derived state). synteny -- Portions of chromosomes in which gene order is conserved. systematics -- Field...2470 days ago
List of visualization tools for network biology
...teraction networks across species to infer protein complexes that are conserved in evolution http://www.cs.t...gration of data such as genomic context, high-throughput experiments, conserved coexpression and previous kno...2296 days ago
Some useful Bioinformatics links
...ull Text https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-15-211 Palindromic gene amplification — an evolutionarily conserved role for DNA inverted repeats...2250 days ago
Tools to Predict the Impact of Missense Variants !
...uch as mutations discovered in cancer or missense polymorphisms” LRT“Identify a subset of deleterious mutations that disrupt highly conserved amino acids within proteināco...2211 days ago