Results for "exact"
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...centromere locations for each chromosome in 14 different yeast species. For yeasts with large centromeres (e.g., S. pombe) Centurion predicts the exact centromere locations. For sev...3020 days ago
- ...f you do not want duplicates to be removed. Clicking on submit then returns a table of your inputs matched against all the outputs selected in the exact order as entered. Results can...
2909 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...ationally expensive, forcing researchers to use faster abundance estimation programs, which only classify small subsets of metagenomic data. Using exact alignment of k-mers, Kraken a...2884 days ago
- ...arched in the database using a modified backward search on a memory-efficient implementation of the Burrows-Wheeler transform, which finds maximum exact matches (MEMs), optionally al...
2884 days ago
- KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows to identify SNPs, indels and...
2834 days ago
OPERA : Optimal Paired-End Read Assembler
...rder and orient the intermediate contigs/scaffolds assembled in a genome assembly project, in a process known as Scaffolding. OPERA is based on an exact algorithm that is guaranteed...2810 days ago
E-MEM: Efficient computation of Maximal Exact Matches
...e The source code can be downloaded here. If you use E-MEM, please cite: N. Khiste, L. Ilie, E-MEM: Efficient computation of Maximal Exact Matches for very large genome...2713 days ago
- ...run are discarded. The extents of each run in each genome are outputted as orthologous segments. The cliques from each run are used to output the exact genomic coordinates of anchor...
2660 days ago
Opera: An optimal genome scaffolding program
...features for the assembly of large and complex genomes.Song Gao, Denis Bertrand, Burton K. H. Chia and Niranjan Nagarajan. OPERA-LG: efficient and exact scaffolding of large, repeat-...2366 days ago
- ...cal, and glocal alignment &mdash with constant & affine gap penalties Algorithms and data structures for efficient text indexing and exact search Heuristics for r...
2364 days ago
