Results for "expectation-maximization"
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MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users can understand the underlying bins (genomes) of the microbes in their metag...2632 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
...combines contig order, distance and orientation in a single optimization objective. The resulting optimization problem is solved using an expectation-maximization procedure and an unconstraine...2554 days ago
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Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short reads is...2701 days ago
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Genome Assembly Tools and Software - PART1 !!
...MaxBin 2.2 – Binning Assembled Metagenomic Sequences MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users can understa...2701 days ago
Bio-Scripts
- blastpgp arguments: -d Database [String] default = nr -i Query File [File In] default = stdin -A Multiple Hits window size (zero for single hit algorit...
965 days ago
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miREM: an expectation-maximization approach for prioritizing miRNAs associated with gene-set
From list of genes... ... to microRNAs Using established miRNA-interaction databases, miREM combines hypergeometric and expectation-maximization algorithms to sieve through your genetic data for microRNA signatures https://bioinfo-csi.nus.edu.sg/mirem2/Tags: miREM, expectation-maximization, approach, prioritize, miRNAs, associated, gene-set
2104 days ago
