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...degrees of phylogenetic granularity and protein sequence conservation. Users should consult the references cited below for a complete explanation of parameter selection and re...2889 days ago
- ...t A typical Minia command line looks like: ./minia -in reads.fa -kmer-size 31 -abundance-min 3 -out output_prefix Type ./minia for a quick explanation of the parameters. For more...
2720 days ago
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Top-level pages
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...ed CG sequence will be converted to the TG sequence. Find step wise explanationand implementation steps at http://dna.cs.byu.edu/bio465/Labs/hmm.shtml Source code with explanation http://www.tannerhelland.com/...3840 days ago
Perl Special Vars Quick Reference
...pe. $! Operating System Error. (What just went 'bang'?) %! Error number hash $^E Extended Operating System Error (Extra error explanation). $@ Eval error. $...2659 days ago
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You and your friend have similar DNA !!!
...that lined up the least were immune system genes. The researchers weren't sure why that happened :/. Olfactory genes might be a straightforward explanation: People who like the same sme...3584 days ago
Bio-Scripts
- ...is empty OTHER: --disable-multithreading disable multithreading -h|--help Output brief explanation of program usage -V|--ver...
2141 days ago
Tags
Understating pacbio reads name !
m140415_143853_42175_c100635972550000001823121909121417_s1_p0/553/3100_11230 0.99 24 └1┘└─────2─────┘└──3─┘└────────────────4────────────────┘└5┘└6┘└7┘└────8────┘└─9─┘└10┘ "m" = movie Time of Run Start (yymmdd_hhmmss) Instrument Serial Number SMRT Cell Barcode Set Number (a.k.a. "L...Tags: pacbio, file, name, explanation
2005 days ago
Comments
Comment on "Perl and BioPerl Tutorials"
Perl FAQ with nice explanation http://learn.perl.org/faq/perlfaq4.html3238 days ago
