How to extract all the reads mapped at specific region in a genome?
I want to extract all the reads mapped at chr5: 200-6000.Tags: extract, reads, mapped, bam, sam, ngs
2285 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
SeqMonk is a program to enable the visualisation and analysis of mapped sequence data. It was written for use with mapped next generation sequence data but can in theory be used for any dataset which can be expressed as a series of genomic positions. It's main features are: Import of mapped da...Tags: SeqMonk, tool, visualise, analyse, high, throughput, mapped, sequence, data
2061 days ago