Results for "protein modeling"
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In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approa...e used to annotate the sequence. Both search by signal, content and homology (protein...2808 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorit...nge. We present methods for the identification of protein-coding genes based on their p...essure to conserve the reading frame of functional proteins...2732 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a minimal set of tools that would reach state-of-the-art...
1949 days ago
- This is a comprehensive update to Shaun Purcell's PLINK command-line progra...er Chang with support from the NIH-NIDDK's Laboratory of Biological Modeling, the Purcell Lab at...
2745 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene region...of the sample for each target region, and a separate file with the translated protein...
2738 days ago
- Topics Displaying and describing data Modeling distributions of data Describing relationships in quantitative data Designing studies Probability Random variables Sampling distributi...
2734 days ago
- Motif based sequence analysis suits The MEME Suite allows the biologist to discov...l motifs in collections of unaligned nucleotide or protein sequences, and to perform a w...uite supports motif-based analysis of DNA, RNA and protein...
2689 days ago
- BioDownloader is a program for downloading and/or updating files from ftp/http servers. The program has unique feat...settings for common bioinformatics file-synchronization needs, including the Protein...
2624 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in multiple genomes as map "ancho...BLAT to do this all-vs-all comparison with alignments being performed in protein...
2644 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much a...viously available only for small-scale analyses of proteins...2644 days ago
