Results for "pyrosequencing data"
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RepeatModeler is a de-novo repeat family identification and model...boundaries and family relationships from sequence data. RepeatModeler assists in aut...the runs of RECON and RepeatScout given a genomic database and uses the output to bu...2830 days ago
- Most variant calling pipelines result in files containing large q...f) is an increasingly popular format for this data. The format of these files an...ir content is discussed in the vignette ‘vcf data.’ These files are typic...
2829 days ago
Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2817 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to desi...e of species. GeneMark-ET is a gene prediction tool that incorporates RNA-Seq data into unsupervised training an...
1964 days ago
- Before uploading a data file, check the samples gallery to make sure that your data format is compatible. Your file must be plain text. Your data values must be non-negat...
2815 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short seque...yout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the key data structure. It is inspired by...
2808 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. NGS technologies brought a d...
2812 days ago
- VALET is a pipeline for performing de novo validation of metagenomic assemblie...uality of different assemblies. For comparing multiple assemblies of the same data-sets, VALET also reports an o...
2795 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that...genomes, with a focus on handling genome assembly data. The application is available...s, draft genomes or even raw, unassembled sequence data. BRIG also accepts SAM-forma...2787 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DECIPHER, see the...
2787 days ago
