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Results for "quality"

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• • Jit@jit.aber

  

  Reads QC http://evomicsorg.wpengine.netdna-cdn.com/wp-content/uploads/2015/01/introQC.pdf #Quality #Reads #NGS

  Tags: Quality, Reads, NGS

  2830 days ago

• • Jit@jit.aber

  

  reformat.sh in=reads.fq out=highQuality.fq maq=16 (that will throw away all reads with average quality below 16) #Filter #BBMap #Quality

  Tags: Filter, BBMap, Quality

  2162 days ago

• • BioJoker@biojoker

  

  #CheckM provides a set of tools for #assessing the #quality of #genomes recovered from isolates, single cells, or #metagenomes. http://ecogenomics.github.io/CheckM/

  Tags: CheckM, assessing, quality, genomes, metagenomes

  1948 days ago

• • Jit@jit.aber

  

  #Convert #FASTQ to FASTA and set bases of #quality lower than 20 to N $ seqtk seq -aQ64 -q20 -n N IN.fastq > OUT.fasta

  Tags: Convert, FASTQ, quality

  993 days ago