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BIMA V3: an aligner customized for mate pair library sequencing
...introduction of library preparation protocol artifacts (biotin junction reads, paired-end read contaminatio...chimeras, etc.), and presence of structural variant breakpoints within reads increases mapping and alignme...2710 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
...esign tools able to assemble, de novo, an organism sequenced with short reads, the results are still far from those achievable with long reads. In this paper, we propose a...2706 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
...rely on global alignment: regions of the two assemblies representing the same genomic locus (called blocks) are identified through reads' alignments and stored in a&n...2706 days ago
2705 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any number...2705 days ago
2705 days ago