Results for "targeted sequencing"
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OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wi...PERA-long-read that enables scaffolding with long-reads from third-generation sequencing technologies (PacBio or Oxfor...2808 days ago
- These tutorials are written for hundreds of...ith large volume of next-generation sequencing (NGS) data. NGS technologies...ht a dramatic shift in the world of sequencing. Merely five years back, geno...s government agencies. The tasks of sequencing and assembly were handled by...
2812 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We ha...nt of genome assembly software in a rapidly changing field of next-generation sequencing. The main results of GAGE hav...2810 days ago
- Development of cancer is driven by somatic alterations, including numerical and struct...y array-Comparative Genomic Hybridization (CGH) or by (low-pass) whole genome sequencing (WGS). First, ‘GeneBreak’ col...
2167 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powe...erall short RNA) expression using short-read deep sequencing data. In its present implemen...the analysis of reads generated with the Illumina sequencing platform. MIRO allows to prep...
2783 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharact...ical diversity present in a sample. The newest sequencing technologies have simultaneously made metagenomics easier, by making the sequencing process faster, and more diff...
2777 days ago
- Visualization has played an extremely important role in th...een found in the transcriptome previously, genome sequencing did not identify a direct chr...osomal fusion between these two genes. After SMRT sequencing, Ribbon shows that there are...
2766 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics) fields are known for...
2766 days ago
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing reads by mimicking real seque...marized from large recalibrated sequencing data. ART can also simulate r...ajor commercial next-generation sequencing platforms: Illumina's Solexa,...
2753 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for...nces from high-throughput DNA sequencing reads. Targeted bait capture is a technique for...ative paralogs, and calculate sequencing depth. For more information,&...
2752 days ago
