...the following error:
fail to open file './temporarySam'
[bwa_aln_core] write to the...sec[E::hts_open_format] Failed to open file temporarySamsamtools sort: can't open "tem...| /usr/local/bin/samtools sort -@ 20 -no - temporarySam > FALCON-Unzip-Scaff.bamMa...
DOWNLOAD LINK: https://github.com/BioInf-Wuerzburg/proovread/raw/master/util/blasr-1.3.1/blasr
I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following error:
fail to open file './temporarySam'
[bwa_aln_core] write to the disk... 0.09 sec[bwa_aln_core] 70778880 sequences ha...