BOL: Results for "vcfR"

Results for "vcfR"

- Archana Malhotra@archana
vcfR
...are typically intended to be post-processed (i.e., filtered) as an attempt to remove false positives or otherwise problematic sites. The R package vcfR provides tools to facilitate...
2817 days ago
- Jit@jit.aber
vcfR: a package to manipulate and visualize VCF data in R
VcfR is an R package intended to allow easy manipulation and visualization of varian...a VCF file or converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF d...
2020 days ago

- Jit@jit.aber
Plot VCF with R !
library(vcfR) # Input the files. vcf
2061 days ago
- Jit@jit.aber
R script to plot VCF file
library(vcfR) vcf_file
1526 days ago

- Archana Malhotra@archana
vcfR
Most variant calling pipelines result in files containing large quantities of variant information. The variant call format (vcf) is an increasingly popular format for this data. The format of these files and their content is discussed in the vignette ‘vcf data.’ These files ...
Tags: Bioinformatics, Analysis, NGS, vcfR, R, Visualization, VCF, Genome
2817 days ago
- Jit@jit.aber
vcfR: a package to manipulate and visualize VCF data in R
VcfR is an R package intended to allow easy manipulation and visualization of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices from the VCF data for use with typical R functions. Th...
Tags: vcfR, Tools, variant, call, format, files, BAM, plot
2020 days ago