Install ImageMagick from Unix Source
...n to accept ISO C99... (cached) none neededchecking CFLAGS for maximum warnings... -Wallchecking whether make...9486: AX_COMPILER_FLAGS: command not foundchecking CFLAGS for maximum warnings... (cached) -Wallchecking if...2190 days ago
REAPR: a universal tool for genome assembly evaluation
...peline to automatically break incorrect scaffolds and flag other errors in an assembly for manual inspection. It reports mis-assemblies and other warnings, and produces a new broken as...2995 days ago
Frequent words problem solution by Perl
...st frequent k-mers in a string.#Given: A DNA string Text and an integer k.#Return: All most frequent k-mers in Text (in any order).use strict;use warnings;my $string="ACGTTGCATGTCGCATG...3297 days ago
Reverse Complement Problem Solved with Perl
...1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";my $f...3297 days ago
Genome Assembly Tools and Software - PART1 !!
...peline to automatically break incorrect scaffolds and flag other errors in an assembly for manual inspection. It reports mis-assemblies and other warnings, and produces a new broken as...2730 days ago
Perl Special Vars Quick Reference
...of program start. $^V Perl version. $^W Status of -w switch ${^WARNING_BITS} Current set of warning checks enabled by use warnings; $^X Perl executable na...2688 days ago
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Count the frequency of base G in a given DNA sequence
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #initialize $countG and $currentPos my $countG = 0; my $currentPos = 0; #calculate the length of $DNA my...2961 days ago
Minimap warning "[WARNING] For a multi-part index, no @SQ lines will be outputted."
While mapping minimap2 return following warning: [WARNING] For a multi-part index, no @SQ lines will be outputted. How to resolve it.Tags: minimap2, warnings, @SQ, index
2167 days ago