Our Sponsors



Download BioinformaticsOnline(BOL) Apps in your chrome browser. BOLChromeApps

Freelancer

AdvertiseWithUs

Question: Question: I need Pipeline for Microarray data analysis using r/other software !!

Govardhan Anande
1318 days ago

Question: I need Pipeline for Microarray data analysis using r/other software !!

If anyone has workflow or pipeline for microarray analysis then please provide me.

Best Answer
Other Answers
0

There are several packages and tools for this purpuse

AMDA is freely available as an R package for the automated microarray data analysis, available under the GPL license. The package as well as an example analysis report can be downloaded in the Services/Bioinformatics section of the Genopolis http://www.genopolis.it/

Genopolis supports two oligonucleotide microarray whole-genome gene-expression platforms—Affymetrix® and Illumina®—to offer a range of cost and performance options suitable for a variety of experimental questions.Paper http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1534071/

 

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data http://www.gepas.org/

Paper http://nar.oxfordjournals.org/content/33/suppl_2/W616.abstract

0

0

Hi Govardhan,

The bioconductor search for microarray returned 3448 results at http://www.bioconductor.org/help/search/index.html?q=microarray

Many of them will fix for you research requirement.

Thanks