Results for "HGT"
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...ely related organisms. One unique and powerful feature of the DarkHorse HGT Candidate database is the opportunity to explore the phylogenetic background of potential HGT donors as well as recipients....2865 days ago
- ...genome architecture. Existing HGT detection algorithms rely on...s recipient genome. Detecting HGT between closely related speci...great importance in detecting HGT between congeneric species or...ia, is considered a validated HGT product. We first employed th...
2865 days ago
Scripts for the analysis of HGT in genome sequence data.
Scripts for the analysis of HGT in genome sequence data2339 days ago
HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes
HGT-Finder: (i) can be used for HGT detection in both prokaryotes and eukaryotes, (ii) can report a statistical P value for each gene to indicate how likely it is to be...2291 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
Alien_hunter is an application for the prediction of putative Horizontal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs). An IVOM a...2300 days ago
alienness : Rapid Detection of Candidate Horizontal Gene Transfers across the Tree of Life
Horizontal gene transfer (HGT) is the transmission of genes between organisms by other means than parental to offspring inheritance. While it is prevalent in prokaryotes, HGT is less frequent in eukaryote...2237 days ago
- SWGIS v2.0 along with the EuGI database, which houses GIs identified in 66 different eukaryotic species, and the EuGI web-resource, provide the first comprehensive resource for studying HGT in eukaryotes. https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-4724-8
2176 days ago
- ...detection of putative horizontal gene transfer (HGT) events based on sequence hom...York, Buffalo, USA Zhu Q, Kosoy M, Dittmar K. HGTector: an automated method fac...2014. 15:717. Usage: Simply execute perl HGTector.pl, or, open GUI.ht...
1922 days ago
ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes
...late Bayesian likelihoods for each ‘alien genes’ with an unusual sequence composition according to the host genome background to detect HGT events in prokaryotes. https...1382 days ago
