BOL: ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes

Bookmarks
Jit
ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes

ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes

By Jit 1594 days ago

ShadowCaster
hybrid
approach
detection
horizontal
gene
transfer
prokaryotes
HGT

ShadowCaster implements an evolutionary model to calculate Bayesian likelihoods for each ‘alien genes’ with an unusual sequence composition according to the host genome background to detect HGT events in prokaryotes.

https://www.mdpi.com/2073-4425/11/7/756/htm

https://shadowcaster.readthedocs.io/en/latest/

https://github.com/dani2s/ShadowCaster_testData

BOL

Jit

Our Sponsors

ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes