A Brief Bioinformatics Tutorial
...form a multiple alignment of the homologues you've selected and how to edit this alignment. The Structure part is about molecular visualization, homology modeling and structural domai...3628 days ago
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FSA: Fast Statistical Alignment
...e Neighbor-Joining build a phylogeny using only pairwise divergence estimates, FSA builds a multiple alignment using only pairwise estimations of homology. This is made possible by the...2636 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...oftware computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coord...2624 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...ements. NCBI has developed an automatic prokaryotic genome annotation pipeline that combines ab initio gene prediction algorithms with homology based methods. The first vers...2537 days ago
RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
RITA is a standalone software package and Web server for taxonomic assignment of metagenomic sequence reads. By combining homology predictions from BLAST or UBLAST with compositional c...2342 days ago
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UPhO: Scripts for homology and orthology assessment from genomic sequences.
UPhO finds orthologs with and without inparalogs from input gene family trees. Refer to the Documentation.pdf for more detailed explanations on its usage, installation a...1929 days ago
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