BioStar published a blog post NVIDIA and Arc Institute Unveil Evo 2: A Breakthrough AI for DNA Design- BioStar published a blog post Genome Simulation with SLiM and msprime
- BioStar published a blog post The Future of Bioinformatics: Innovations and Opportunities
- BioStar published a blog post The "Ifs" and "Buts" of NGS Quality Control and Trimming
- BioStar posted a new ad in the ResearchLabs Rennison Lab !
- BioStar published a blog post Exploring Bioinformatics Job Websites: Your Gateway to a Thriving Career
- BioStar published a news post Mpox Public Health Emergency of International Concern
Evaluation of genome assembly software based on long reads
By BioStar 2244 days agoTGS technologies have been used to produce highly accurate de novo assemblies of hundreds of microbial genomes and highly contiguous reconstructions of many dozens of plant and animal genomes, enabling new insights into evolution and sequence...
Mpox Public Health Emergency of International Concern
By BioStar 223 days agoThe World Health Organization Health Organization (WHO) declared the mpox outbreak a Public Health Emergency of International ConcernNCBI Datasets pages
By BioStar 623 days agoAssembly and Genome record pages now redirect to new NCBI Datasets pages.SPADes team announce new version SPADes v3.15
By BioStar 1531 days agoNew SPAdes 3.15.0.0. announced by the SPADes teamThe pandemic has worsened the plight of postdoctoral researchers !
By BioStar 1657 days agoThe pandemic has worsened the plight of postdoctoral researchers. Funders need to be offering more than moral support.
Jit
5557 points
5557 points
Jitendra Narayan
2547 points
2547 points
Rahul Nayak
2300 points
2300 points
Neel
1626 points
1626 points
BioStar
1209 points
1209 points
Question: How to downgrade the Perl
Question: Alienomics error, how to fix it !
Question: What is the p-value?
Question: Unable to restart Apache !
- By BioStar 429 days agoDelete all the headers from multifasta file $ awk 'BEGIN {print ">"ARGV[1]};!/^>/{print}' test.fa #fasta #delete #header #multifasta
- By BioStar 433 days agoData resource for metagenomics benchmarking https:/
/ #Tools #Metagenomeftp.ebi.ac.uk/ pub/ databases/ metagenomics/ taxon_benchmarking/ - By BioStar 484 days ago
Next Generation Sequencing (NGS)
https://en.wikipedia.org/wiki/Sequencing
Important Bioinformatics Tools !
Last updated 239 days ago by BioStar1. Ktrim: An extra-fast, accurate adapter trimmer for sequencing data. It processes FASTQ files from multiple lanes with minimal mismatching and over-trimming of adapters.2. BWA MEM: A reliable alignment tool (particularly for mapping ALT contigs...-
Bioinformatics tools for genome assembly !
Last updated 611 days ago by BioStarThere are numerous genome assembly tools available, each with its strengths and weaknesses. Here is a list of some widely used genome assembly tools as of my last update in September 2021: SPAdes: An assembler specifically designed for... -
Tools for Geospatial data analysis !
Last updated 735 days ago by BioStarGeospatial data is becoming increasingly important in many fields, including urban planning, environmental science, public health, and more. These tools can help you work with data from a variety of sources, including satellite imagery, GPS data,... -
Type of SSR
Last updated 748 days ago by BioStarTypes of SSRs (simple sequence repeats), SSRs are short DNA sequences consisting of a tandem repeat of a few nucleotides, typically 2-6 nucleotides in length. There are different types of SSRs based on the length and pattern of the repeated...
Perl script to calculate GC content !
By BioStar 421 days ago
Let BioStar know what you think!
GenoFig: a user-friendly application for the visualization and comparison of genomic regions
By BioStar 232 days agoforgemia.inra.fr - Tool for graphical vizualisation of annotated genetic regions, and homologous regions comparison. It is an independent recoding of Easyfig 2 initially developped by at the S. Beatson Lab [https://mjsull.github.io/Easyfig/] Download the GenoFig...UnCoVar: Workflow for Transparent and Robust Virus Variant Calling, Genome Reconstruction and...
By BioStar 232 days agoikim-essen.github.io - UnCoVar: Workflow for Transparent and Robust Virus Variant Calling, Genome Reconstruction and Lineage Assignment Using state of the art tools, easily extended for other viruses Tool and database updates for critical components via...Free resources to learn statistics
By BioStar 263 days agoonline.stat.psu.edu - Welcome to the course notes for STAT 414: Introduction to Probability Theory. These notes are designed and developed by Penn State's Department of Statistics and offered as open educational resources. These notes are free to use under...P10K: The Protist 10,000 Genomes
By BioStar 263 days agongdc.cncb.ac.cn - The Protist 10,000 Genomes (P10K) Project aims to decipher the genome sequences and construct a comprehensive database resource containing over 10,000 species of protists, encompassing representatives from every major clade. Samples were collected...
NVIDIA and Arc Institute Unveil Evo 2: A Breakthrough AI for DNA Design
By BioStar 33 days agoNVIDIA and the Arc Institute have introduced Evo 2, a groundbreaking AI model designed to understand, predict, and generate DNA sequences. This marks a major advancement in computational biology, offering scientists an unprecedented tool to decode...Genome Simulation with SLiM and msprime
By BioStar 53 days agoSLiM and msprime are valuable tools for genome simulation, each serving distinct but complementary purposes in population genetics research. By leveraging the strengths of both simulators with slendr, researchers can conduct robust and efficient...Stay Connected and Productive: Unlock the Power of Screen, Tmux, and Mosh for Bioinformatics
By BioStar 63 days agoIf you are a bioinformatician, chances are you have spent hours running long, complex analyses on remote servers only to lose your session because of an unstable connection. Frustrating, isnt it? Fear not! With tools like screen, tmux, and mosh,...The Future of Bioinformatics: Innovations and Opportunities
By BioStar 64 days agoThe future of bioinformatics is boundless, with opportunities to revolutionize our understanding of life and improve human health. As technologies evolve and collaborations flourish, bioinformatics will undoubtedly remain at the forefront of...
