Results for "Map"
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irishgrid: Irish Grid Mapping System
Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a...3408 days ago
mrFAST: Micro Read Fast Alignment Search Tool
mrFAST is a read mapper that is designed to map short reads to reference genome with a specia...variation and segmental duplications. mrFAST maps short reads with respect to.... mrFAST is designed to find 'all' mappings for a given set of reads...2922 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...aim of the research is to know where the large-scale [chromosomal by chromosome] of several primates was equal/different, having at a glance a map of the entire genomes.2921 days ago
- segemehl is a software to map short sequencer reads to reference genomes. Unlike other methods, segemeh...hermore, segemehl is not limited to a specific read length and is able to map primer- or polyadenylati...
2907 days ago
- ...or executed individually to generate specific charts and tables. GAEMR standardizes input by converting a variety of read types to Binary Alignment Map (BAM) format, allowing a sing...
2873 days ago
- ...sembled contigs using mate-pair data. It also produces editable scaffold maps, allowing either to build ga...s the small contigs within scaffolds buildfasta converts the scaffold(s) map(s) into Fasta sequences.
2843 days ago
CGView - Circular Genome Viewer
...iew is useful for producing high-quality genome maps for use in publications and...raction, and more flexibility in how the genome map is rendered. To aid with easi...graphical user interface for customizing genome maps. Styling attributes such as...2776 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and...MIs) can now be specified explicitly, or set at random. The map can hold an unlimited number...2763 days ago
- ...llumina sequencing platform. MIRO allows to preprocess the Solexa-reads, map them flexibly to several reference genomes using one of four different mappers, create differential gene...
2760 days ago
Maq: Mapping and Assembly with Quality
Maq stands for Mapping and Assembly with Quality It builds assembly by mapping short reads to reference sequences...jects/maq/. Maq is previously known as mapass2. Run Maq Now Follow the...diploid reference and read sequences, map reads, call variants and eval...2712 days ago
