Statistics of current Sequencing and Bioinformatics market
This survey conducted by Oxford Gene Technology, provider of innovative genetics&nb...eneration sequencing. (Source:http://www.news-medical.net/news/20130821/Oxford-Gene-Technology-releases-next...3901 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...or-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d rea...and error profiles, including: Illumina, PacBio and Oxford Nanopore.This is an especiall...3215 days ago
Scaffolding of a bacterial genome using MinION nanopore sequencing
...ing substantially longer reads is emerging, notably the Pacific Biosciences (PacBio) RS II system and the MinION system, released in early 2014 by Oxford Nanopore Technologies through...3215 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software is currently alph...2905 days ago
OPERA : Optimal Paired-End Read Assembler
...ease contains the wrapper script OPERA-long-read that enables scaffolding with long-reads from third-generation sequencing technologies (PacBio or Oxford Nanopore). The manuscript des...2786 days ago
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npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
npScarf (jsa.np.npscarf) is a program that scaffolds and completes draft genomes assemblies in real-time with Oxford Nanopore sequencing. The pipeline can run on a computing clus...2530 days ago
orthodotter: Synteny plots (oxford grid)
orthodotter -h -------------------------------------------------------------------------------- orthodotter - Plot orthologous genes on an oxford grid. -f <file> :...2452 days ago
poRe: an R package for the visualization and analysis of nanopore sequencing data
Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has hu...2346 days ago