Results for "Software"

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  • Pacbio Long Reads Compatible Software and Tools

    The following software packages are known to be compatible with PacBio® data, in a...date license information. A separate page lists commercial software. Know of any other open source software for PacBio data? Email u...

    71 days ago

  • EasyBuild

    EasyBuild is a software build and installation framework that allows you to manage (scientific) software on High Performance Computing (HPC) systems in an efficient way.A full list of supported software packages is available here.

    118 days ago

  • Velvet tutorial

    The objective of this activity is to help you understand how to run Velvet in general, how to accurately estimate the insert size of a paired-end library throu...

    168 days ago

  • segemehl

    segemehl is a software to map short sequencer reads to reference genomes. Unlike...SA).  More at http://www.bioinf.uni-leipzig.de/Software/segemehl/ Manual http://www.bioinf.uni-leipzig.de/Software/segemehl/segemehl_manual_0_1_...

    381 days ago

  • Ten recommendations for creating usable bioinformatics command line software

    Bioinformatics software varies greatly in quality. In terms of usability, the command line interf...a tool will be used. Here I present ten recommendations for command line software author’s tools to follo...

    1083 days ago

  • UCSC Genome Browser and Blat software !

    ...running the binary with no arguments. The UCSC Genome Browser and Blat software are free for academic, nonpro...utoXmlFor information about commercial licensing of the Genome Browser software, see http://genome.ucsc.edu/l...

    463 days ago

  • Spines

    Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for efficient data ma...

    179 days ago

  • Spines

    Spines Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for effi...

    472 days ago

  • Bioinformatics software for biologists in the genomics era

    ...h are not bioinformaticians, so a gap exists between the user-friendly software needed and the scripting/prog...expansion of the fundamental paradigms under which biologist-friendly software tools are designed and develo...

    1250 days ago

  • MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

    MyPro is an improved genomics software pipeline for prokaryotic genomes. MyPro is user-friendly and requires...se. It performed better than de novo assemblers and contig integration software. Produces more contiguous ass...

    162 days ago