Results for "hybrid"
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...omponent system protein-protein interactions (PPIs). The methods implemented in MetaPred2CS are 2 co-evolutionary methods: in-silico two hybrid (i2h) and mirror tr...2611 days ago
- ...fferent sequencing technologies either in a single assembly run (a true hybrid assembly) or by mapping one type of data to an assembly of other sequencing type (a semi-hybrid assembly (or mapping)) or by...
2942 days ago
- ...reads represents a significant leap forward over previous composition-based classification methods. PhymmBL (rhymes with "thimble"), the hybrid classifier included in this d...
2755 days ago
CISA: Contig Integrator for Sequence Assembly
...tool, named CISA, has been developed to integrate the assemblies into a hybrid set of contigs, resulting in...ith the assemblies generated by the state-of-the-art assemblers and the hybrid assemblies merged by existing...2689 days ago
Many-Core Engine (MCE) for Perl example
...ors for preserving output order. MCE::Mutex Provides a simple semaphore implementation supporting threads and processes. MCE::Queue Provides a hybrid queuing implementation for MC...2642 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...orrect sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads. It uses a hybrid strategy, meaning that it use...2573 days ago
- ...read assemblies and reconstructing the genome as larger scaffolds. AMOS-Hybrid is a pipeline written in the...d create scaffolds where possible. Source code and executables for AMOS-Hybrid are available here: AMOS...
2532 days ago
- ...e large metagenomes from billions of Illumina sequencing reads of complex microbial communities. Disco was parallelized for computer clusters in a hybrid architecture that integrated...
2482 days ago
Unicycler: Hybrid assembly pipeline for bacterial genomes
...a miniasm+Racon pipeline. For the best possible assemblies, give it both Illumina reads and long reads, and it will conduct a hybrid assembly....2359 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
...lyses were based on multiple blastn searches with short sequence fragments. They revealed a number of probable bacterial contaminations as well as hybrid scaffolds that contain both b...2346 days ago
