Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...r domain dig -x host — reverse lookup host lsof -i tcp:1337 — list all processes running on port 1337 Searching grep pattern files — search for pattern in files grep -r...2272 days ago
Awk for Bioinformatician and computational biologist
...uctured data and is mostly used for pattern scanning and processing. It searches one or more files to see if...attern matches, no action will be performed.In the above syntax, either search pattern or action are optiona...2271 days ago
Computational resources for TE discovery and TE detection
...org/prj/TE_nest/TE_nest.html TRANSPO http://alggen.lsi.upc.es/recerca/search/transpo/transpo.html TSDfinder http://www.ncbi.nlm.nih.gov/CBBresearch/Landsman/TSDfinder/ Tu Lab...2265 days ago
Tools for Protein-Protein Docking !
...xes: 3D-Dock Suite Global rigid search: FFTShape complementarity and...e-chains 3D-Garden Global rigid search in ensamble Shape complement...ions GRAMM-X Global rigid search: FFT. smooth protein surface...nformations PyDock Global rigid search:FFTShape complementarity res...2193 days ago
Gap filling or Contigs extensions tools !
...seful explanation of several tools. https://bioinformaticsonline.com/search?q=scaffolding&entity_type=object&entity_subtype=bookmarks&offset=0&search_type=entities I could be w...2156 days ago