BOL: Question: Is it possible to find out particular secondary metabolite from sequenced genome? or even from the in silico metabolic models of that living organisms?

Question: Question: Is it possible to find out particular secondary metabolite from sequenced genome? or even from the in silico metabolic models of that living organisms?

Swapnil Bhalke
3943 days ago

Question: Is it possible to find out particular secondary metabolite from sequenced genome? or even from the in silico metabolic models of that living organisms?

Hello everyone,

I am basically biotechnology student.I am just aware about very basic knowledge about bioinformatics and programming language.The genome for Yarrowia lipolytica is already sequenced and recently two in silico metabolic models also developed.Please help me to find out enzyme cascade reqired for production of volatile compounds after fatty acid degradation and what other commecial products can be obtained from this enzyme cascade.

Best Answer

Hi Swapnil,

There is one tool named antiSMASH 2.0 which is a versatile platform for genome mining of secondary metabolite producers. I hope this will help you.

Website: http://antismash.secondarymetabolites.org/

Cheers

Jitendra Narayan 3942 days ago

Thank you Sir.....

— Swapnil Bhalke 3942 days ago

BOL

Swapnil Bhalke

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Question: Question: Is it possible to find out particular secondary metabolite from sequenced genome? or even from the in silico metabolic models of that living organisms?