Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Harvest
By Jit 2851 days ago
http://harvest.readthedocs.io/en/latest/index.html
Harvest is a suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and phylogenetic trees.
Tools
- Parsnp - Core-genome alignment and analysis
- Gingr - Interactive visualization of alignments, trees and variants
- HarvestTools - Archiving and postprocessing
Citation
Treangen TJ, Ondov BD, Koren S, Phillippy AM. The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes. Genome Biology, 15 (11), 1-15 [PDF]
