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  • Hapsembler: An Assembler for Highly Polymorphic Genomes

Hapsembler: An Assembler for Highly Polymorphic Genomes

http://compbio.cs.toronto.edu/hapsembler/

Hapsembler is a haplotype-specific genome assembly toolkit that is designed for genomes that are rich in SNPs and other types of polymorphism. Hapsembler can be used to assemble reads from a variety of platforms including Illumina and Roche/454.

http://compbio.cs.toronto.edu/hapsembler/