Jit
Enthusiast computational biologist with business dream !!!
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minialign: fast and accurate alignment tool for PacBio and Nanopore long reads
By Jit 2375 days ago
https://github.com/ocxtal/minialign
Minialign is a little bit fast and moderately accurate nucleotide sequence alignment tool designed for PacBio and Nanopore long reads. It is built on three key algorithms, minimizer-based index of the minimap overlapper, array-based seed chaining, and SIMD-parallel Smith-Waterman-Gotoh extension.
