BOL: LSC: Improving PacBio Long Read Accuracy by Short Read Alignment

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Abhimanyu Singh
LSC: Improving PacBio Long Read Accuracy by Short Read Alignment

LSC: Improving PacBio Long Read Accuracy by Short Read Alignment

By Abhimanyu Singh 2298 days ago

https://www.healthcare.uiowa.edu/labs/au/LSC/

Added Command line argument support.
Multi-stage execution modes.
Support for parallelization. Now execution proceeds in batches of long reads the size of which can be set by --long_read_batch_size N.
Better compressed intermediate files.
Added utilities folder.
Added support for multiple short read files.
Removed use of configuration file.