Jit
Enthusiast computational biologist with business dream !!!
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Rebaler: program for conducting reference-based assemblies using long reads.
By Jit 2048 days ago
https://github.com/rrwick/Rebaler
Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences.
I made Rebaler for bacterial genomes (specifically for the task of testing basecallers). It should in principle work for non-bacterial genomes as well, but I haven't tested it.
