Jit
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d2Tools: The toolbox for counting the frequency of k-tuple from sequencing datasets and calculate the dissimilarity
By Jit 2257 days ago
https://code.google.com/archive/p/d2-tools/
d2Tools are the toolbox for counting the frequency of K-tuple from sequencing datasets and then calculating the pairwise dissimilarity matrix between samples with the d2-style(d2/d2*/d2S representing d2/d2Star/d2shepp, respectively) measures. Hao, Dai, Eucliean, Mahattan, and Chebyshev distance measures are also included in d2Tools.
Manual at https://code.google.com/archive/p/d2-tools/wikis/d2ToolMannual.wiki
