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  • sim3C: Read-pair simulation of 3C-based sequencing methodologies (HiC, Meta3C, DNase-HiC)

sim3C: Read-pair simulation of 3C-based sequencing methodologies (HiC, Meta3C, DNase-HiC)

https://github.com/cerebis/sim3C

Required python modules

  • biopython
  • intervaltree
  • numpy
  • scipy
  • tqdm
  • PyYAML