shinyChromosome is a graphical user interface for interactive creation of non-circular whole genome diagrams developed using the R Shiny package.
To create single-genome plot by aligning genome data along all chromosomes of a single genome, go to the Single-genome plot menu.
To cretae two-genome plot for comparison of data across two genomes, go to the Two-genome plot menu.
For the detail format of input data, check the Input data format submenu of the Help menu.
shinyChromosome is deployed at http://150.109.59.144:3838/shinyChromosome/, http://shinyChromosome.ncpgr.cn, and https://yimingyu.shinyapps.io/shinyChromosome for online use. The source code and manual of shinyChromosome are freely available at https://github.com/venyao/shinyChromosome.
https://yimingyu.shinyapps.io/shinychromosome/
https://www.sciencedirect.com/science/article/pii/S1672022919301883
