Jit
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InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
By Jit 1088 days ago
https://github.com/dmcblab/InfoGenomeR
InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific CNAs, and haplotype information to identify the optimal breakpoint graph representing cancer genomes.
