BOL

t/elink_llinks.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 84 tests but ran 0.
t/elink_ncheck.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 58 tests but ran 0.
t/elink_neighbor.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 61 tests but ran 0.
t/elink_neighbor_history.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 63 tests but ran 0.
t/elink_scores.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 56 tests but ran 0.
t/epost.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 15 tests but ran 0.
t/esearch.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 31 tests but ran 0.
t/espell.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 20 tests but ran 0.
t/esummary.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 81 tests but ran 0.
t/EUtilParameters.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 12 tests but ran 0.
Files=19, Tests=20, 4 wallclock secs ( 0.13 usr 0.02 sys + 3.09 cusr 0.37 csys = 3.61 CPU)
Result: FAIL
Failed 15/19 test programs. 20/20 subtests failed.
Makefile:975: recipe for target 'test_dynamic' failed
make: *** [test_dynamic] Error 255
CJFIELDS/Bio-EUtilities-1.75.tar.gz
8 dependencies missing (Bio::ASN1::EntrezGene,Bio::DB::GenericWebAgent,Bio::ParameterBaseI,Bio::Root::IO,Bio::Root::Root,Bio::Root::RootI,Bio::Root::Version,Bio::SeqIO); additionally test harness failed
/usr/bin/make test -- NOT OK
//hint// to see the cpan-testers results for installing this module, try:
reports CJFIELDS/Bio-EUtilities-1.75.tar.gz

I'm struggling to understand what I should focus on before applying to PhD bioinformatics positions

am installing a newer version of cmake which is cmake 3.10.1 and the make command is giving me error while building CXX object source.

I have installed the ninja 1.5.1 but still getting the same error.

used this to install the cmake:

wget link of the cmake3.10.1

./configure

make (at this stage getting error)

the error is:

[ 83%] Building CXX object Source/CMakeFiles/CMakeLib.dir/cmGlobalNinjaGenerator.cxx.o
/media/nadia/967E9B477E9B1F55/data/cmake-3.10.1/Source/cmGlobalNinjaGenerator.cxx: In member function ‘void cmGlobalNinjaGenerator::AppendTargetDependsClosure(const cmGeneratorTarget*, cmNinjaOuts&, bool)’:
/media/nadia/967E9B477E9B1F55/data/cmake-3.10.1/Source/cmGlobalNinjaGenerator.cxx:1077:40: error: ‘class std::map<const cmGeneratorTarget*, std::set<std::basic_string<char> > >’ has no member named ‘emplace_hint’
Source/CMakeFiles/CMakeLib.dir/build.make:5942: recipe for target 'Source/CMakeFiles/CMakeLib.dir/cmGlobalNinjaGenerator.cxx.o' failed
make[2]: *** [Source/CMakeFiles/CMakeLib.dir/cmGlobalNinjaGenerator.cxx.o] Error 1
CMakeFiles/Makefile2:2355: recipe for target 'Source/CMakeFiles/CMakeLib.dir/all' failed
make[1]: *** [Source/CMakeFiles/CMakeLib.dir/all] Error 2
Makefile:162: recipe for target 'all' failed
make: *** [all] Error 2

I get the following error when following command.

 sudo apt-get update && sudo apt-get upgrade

error:

Hit:1 http://ppa.launchpad.net/jonathonf/python-3.6/ubuntu xenial InRelease
Hit:2 http://pk.archive.ubuntu.com/ubuntu xenial InRelease                     
Hit:3 http://ppa.launchpad.net/notepadqq-team/notepadqq/ubuntu xenial InRelease
Hit:4 http://security.ubuntu.com/ubuntu xenial-security InRelease              
Hit:5 http://pk.archive.ubuntu.com/ubuntu xenial-updates InRelease             
Hit:6 http://pk.archive.ubuntu.com/ubuntu xenial-backports InRelease           
Hit:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu xenial InRelease
Hit:8 http://ppa.launchpad.net/webupd8team/java/ubuntu xenial InRelease       
Hit:9 https://cran.rstudio.com/bin/linux/ubuntu xenial/ InRelease
Reading package lists... Done
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Calculating upgrade... Done
The following packages have been kept back:
  linux-generic linux-headers-generic linux-image-generic ubuntu-minimal
The following packages will be upgraded:
  python3-jinja2
1 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
6 not fully installed or removed.
Need to get 0 B/113 kB of archives.
After this operation, 3,072 B of additional disk space will be used.
Do you want to continue? [Y/n] y
(Reading database ... 244953 files and directories currently installed.)
Preparing to unpack .../python3-jinja2_2.8-1ubuntu0.1_all.deb ...
/var/lib/dpkg/info/python3-jinja2.prerm: 6: /var/lib/dpkg/info/python3-jinja2.prerm: py3clean: not found
dpkg: warning: subprocess old pre-removal script returned error exit status 127
dpkg: trying script from the new package instead ...
/var/lib/dpkg/tmp.ci/prerm: 6: /var/lib/dpkg/tmp.ci/prerm: py3clean: not found
dpkg: error processing archive /var/cache/apt/archives/python3-jinja2_2.8-1ubuntu0.1_all.deb (--unpack):
 subprocess new pre-removal script returned error exit status 127
/var/lib/dpkg/info/python3-jinja2.postinst: 6: /var/lib/dpkg/info/python3-jinja2.postinst: py3compile: not found
dpkg: error while cleaning up:
 subprocess installed post-installation script returned error exit status 127
Errors were encountered while processing:
 /var/cache/apt/archives/python3-jinja2_2.8-1ubuntu0.1_all.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
 Why is this so and how to fix it?

i am using fastq dump to convert sra files into fastq.

In case of fastq this tool gives me a message on terminal "Ignoring --- number of reads as the spot length is less than 1"). if my sra file is of 6GBs, i always get fastq file less than the afforementioned size. Ideally it must be a larger fastq file (~10gbs).Why is this so?

Hi!

I want to install LoRDEC using the following tutorial (https://biosphere.france-bioinformatique.fr/wikia2/index.php/Lordec. I am not able to install it in my linux system. Actually the 4th point of this installation tutorial is quite confusing. I am not able to change the variables in make file .

Please see the make file of tool.

# external resources
GATB_VER=1.1.0
GATB=gatb-core-$(GATB_VER)-Linux

# FLAGS
CPPFLAGS =        -I$(GATB)/include/ -std=c++0x -O2 # -g # -O3 -DOLD_GATB # put pre-processor settings (-I, -D, etc) here
CXXFLAGS =gcc-5.4.0
 #-Wall  # put compiler settings here
# put linker settings here
LDFLAGS =         -L$(GATB)/lib/ -lgatbcore -lhdf5 -ldl -lz -lpthread -std=c++0x
#CXX    = g++ # $(CXXFLAGS)
RM      = rm -f
MV    = mv

CFILES_CORRECT = lordec-correct.cpp
CFILES_STATS = lordec-stat.cpp
CFILES_TRIM = lordec-trim.cpp
CFILES_TRIM_SPLIT = lordec-trim-split.cpp
CFILES_GRAPH = lordec-build-SR-graph.cpp

OBJS_CORRECT    = $(CFILES_CORRECT:.cpp=.o)
OBJS_STATS    = $(CFILES_STATS:.cpp=.o)
OBJS_TRIM    = $(CFILES_TRIM:.cpp=.o)
OBJS_TRIM_SPLIT    = $(CFILES_TRIM_SPLIT:.cpp=.o)

PROG        = LoRDEC
PROG_CORRECT    = lordec-correct
PROG_STATS    = lordec-stat
PROG_TRIM    = lordec-trim
PROG_TRIM_SPLIT    = lordec-trim-split
PROG_GRAPH    = lordec-build-SR-graph

# History of versions
VERSION=0.4.1
VERSION=0.5

LICENSE=../LICENSE/Licence_CeCILL_V2.1-en.txt

# for testing
DATA=./DATA
RES=./RES
TEST_SCRIPT=test-lordec.sh

# These also need to be included in distribution package
HPPFILES=lordec-gen.hpp

all:        $(PROG_CORRECT) $(PROG_STATS) $(PROG_TRIM) $(PROG_TRIM_SPLIT) $(PROG_GRAPH)

$(PROG_CORRECT):    $(OBJS_CORRECT)
            $(CXX) $(OBJS_CORRECT) $(LDFLAGS) -o $@

$(PROG_STATS):        $(OBJS_STATS)
            $(CXX) $(OBJS_STATS) $(LDFLAGS) -o $@

$(PROG_TRIM):        $(OBJS_TRIM)
            $(CXX) $(OBJS_TRIM) $(LDFLAGS) -o $@

$(PROG_TRIM_SPLIT):    $(OBJS_TRIM_SPLIT)
            $(CXX) $(OBJS_TRIM_SPLIT) $(LDFLAGS) -o $@

$(PROG_GRAPH):        $(CFILES_GRAPH)
            $(CXX)  $@.cpp -o $@ $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS)


$(OBJS_CORRECT):    %.o: %.cpp
            $(CXX) $< $(CPPFLAGS) -c

$(OBJS_STATS):        %.o: %.cpp
            $(CXX) $< $(CPPFLAGS) -c

$(OBJS_TRIM):        %.o: %.cpp
            $(CXX) $< $(CPPFLAGS) -c

$(OBJS_TRIM_SPLIT):    %.o: %.cpp
            $(CXX) $< $(CPPFLAGS) -c

install_dep:
        wget http://gatb-core.gforge.inria.fr/versions/bin/gatb-core-$(GATB_VER)-Linux.tar.gz && \
        tar -axf gatb-core-$(GATB_VER)-Linux.tar.gz

bin:        
        mkdir bin

instbin:
        $(MV) $(PROG_CORRECT) $(PROG_STATS) $(PROG_TRIM) $(PROG_TRIM_SPLIT) $(PROG_GRAPH) bin

clean:
        $(RM) $(OBJS_CORRECT) $(OBJS_STATS) $(OBJS_TRIM) $(OBJS_TRIM_SPLIT) $(RES)/*

purge:        clean
        $(RM) $(PROG_CORRECT) $(PROG_STATS) $(PROG_TRIM) $(PROG_TRIM_SPLIT) $(PROG_GRAPH)

test:        
        ./$(TEST_SCRIPT)

HI! I am Nadia.

I am trying to align PAcBio data (data from third generation sequencer) using bwa mem. I am getting very less number of aligned reads in SAM file having coverage of less than 10X. I tried to use minimap2 as well for alignment but again the quality of sam file isn,t good. I am getting only few unique reads and they are aligning on reference with soft clipping. Moreover, my SAM file contains many cases of multimapping. The read length of spots is >2kb.

What other options are available to get better alignment results? I am working with this data for the very first time.

I am Dr Olusola B SOKEFUN, male, Nigerian with Lagos State University as an academic staff. I have recently concluded my PhD at the Federal University of Agriculture, Abeokuta in Ogun State Nigeria.

My project topis is 'Phylogeny, Phylogeography and Population Structure of the large river Pranws Macrobrachium species in the Southern Nigeria river drainge system. I sequenced the 12S,16S and the CO1 genes for this work.

I have opted to make evolutionary bioinformatics as specialist area. I wish that I can find a collaborator or expert under whose tutelage I will be guided. My interest is in the circumtropical species such as Peguins, Prawns, Shripms, doves that are found in almost all continents and climes. In the GenBank, several gene segments and sometimes the whole mitogenome have been sequenced. Comparing these available data is of interest to me. I need limited help as I have funding. 

Neelam[Val] python []
Python 3.5.2 (default, Nov 23 2017, 16:37:01)
[GCC 5.4.0 20160609] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> q()
Traceback (most recent call last):
File "", line 1, in
NameError: name 'q' is not defined
>>> exit
Use exit() or Ctrl-D (i.e. EOF) to exit
>>> exit()
Nelaam[Val] which python []
/usr/bin/python
Neelam[Val] sudo apt install python2.7 []
Reading package lists... Done
Building dependency tree
Reading state information... Done
python2.7 is already the newest version (2.7.12-1ubuntu0~16.04.4).
The following packages were automatically installed and are no longer required:
libllvm5.0 libllvm5.0:i386 ocqt562+240-libqt5core5a ocqt562+240-libqt5dbus5
ocqt562+240-libqt5gui5 ocqt562+240-libqt5keychain1
ocqt562+240-libqt5network5 ocqt562+240-libqt5printsupport5
ocqt562+240-libqt5sql5 ocqt562+240-libqt5sql5-sqlite
ocqt562+240-libqt5webkit5 ocqt562+240-libqt5widgets5 ocqt562+240-libqt5xml5
ocqt562+240-qtsvg5
Use 'sudo apt autoremove' to remove them.
The following packages will be upgraded:
libglib2.0-dev
1 upgraded, 0 newly installed, 0 to remove and 218 not upgraded.
9 not fully installed or removed.
Need to get 0 B/1.379 kB of archives.
After this operation, 0 B of additional disk space will be used.
(Reading database ... 592402 files and directories currently installed.)
Preparing to unpack .../libglib2.0-dev_2.48.2-0ubuntu4.1_amd64.deb ...
Unpacking libglib2.0-dev (2.48.2-0ubuntu4.1) over (2.48.2-0ubuntu4) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for libglib2.0-0:amd64 (2.48.2-0ubuntu4.1) ...
Processing triggers for libglib2.0-0:i386 (2.48.2-0ubuntu4.1) ...
Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.4) ...
Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.4) ...
Setting up htop (2.0.1-1ubuntu1) ...
Setting up libglib2.0-dev (2.48.2-0ubuntu4.1) ...
Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.4) ...
Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.4) ...
Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.4) ...
Setting up python2.7 (2.7.12-1ubuntu0~16.04.4) ...
Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.4) ...
Processing triggers for libc-bin (2.23-0ubuntu10) ...
Neelam[Val] python -v []
import _frozen_importlib # frozen
import _imp # builtin
import sys # builtin
import '_warnings' # <class '_frozen_importlib.BuiltinImporter'>
import '_thread' # <class '_frozen_importlib.BuiltinImporter'>
import '_weakref' # <class '_frozen_importlib.BuiltinImporter'>
import '_frozen_importlib_external' # <class '_frozen_importlib.FrozenImporter'>
import '_io' # <class '_frozen_importlib.BuiltinImporter'>
import 'marshal' # <class '_frozen_importlib.BuiltinImporter'>
import 'posix' # <class '_frozen_importlib.BuiltinImporter'>
import _thread # previously loaded ('_thread')
import '_thread' # <class '_frozen_importlib.BuiltinImporter'>
import _weakref # previously loaded ('_weakref')
import '_weakref' # <class '_frozen_importlib.BuiltinImporter'>
# installing zipimport hook
import 'zipimport' # <class '_frozen_importlib.BuiltinImporter'>
# installed zipimport hook
# /usr/lib/python3.5/encodings/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/encodings/__init__.py
# code object from '/usr/lib/python3.5/encodings/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/codecs.cpython-35.pyc matches /usr/lib/python3.5/codecs.py
# code object from '/usr/lib/python3.5/__pycache__/codecs.cpython-35.pyc'
import '_codecs' # <class '_frozen_importlib.BuiltinImporter'>
import 'codecs' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e8b128>
# /usr/lib/python3.5/encodings/__pycache__/aliases.cpython-35.pyc matches /usr/lib/python3.5/encodings/aliases.py
# code object from '/usr/lib/python3.5/encodings/__pycache__/aliases.cpython-35.pyc'
import 'encodings.aliases' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e19be0>
import 'encodings' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e83cf8>
# /usr/lib/python3.5/encodings/__pycache__/utf_8.cpython-35.pyc matches /usr/lib/python3.5/encodings/utf_8.py
# code object from '/usr/lib/python3.5/encodings/__pycache__/utf_8.cpython-35.pyc'
import 'encodings.utf_8' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e279b0>
import '_signal' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/encodings/__pycache__/latin_1.cpython-35.pyc matches /usr/lib/python3.5/encodings/latin_1.py
# code object from '/usr/lib/python3.5/encodings/__pycache__/latin_1.cpython-35.pyc'
import 'encodings.latin_1' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e2a4e0>
# /usr/lib/python3.5/__pycache__/io.cpython-35.pyc matches /usr/lib/python3.5/io.py
# code object from '/usr/lib/python3.5/__pycache__/io.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/abc.cpython-35.pyc matches /usr/lib/python3.5/abc.py
# code object from '/usr/lib/python3.5/__pycache__/abc.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/_weakrefset.cpython-35.pyc matches /usr/lib/python3.5/_weakrefset.py
# code object from '/usr/lib/python3.5/__pycache__/_weakrefset.cpython-35.pyc'
import '_weakrefset' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e30198>
import 'abc' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e2a978>
import 'io' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e2a710>
# /usr/lib/python3.5/__pycache__/site.cpython-35.pyc matches /usr/lib/python3.5/site.py
# code object from '/usr/lib/python3.5/__pycache__/site.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/os.cpython-35.pyc matches /usr/lib/python3.5/os.py
# code object from '/usr/lib/python3.5/__pycache__/os.cpython-35.pyc'
import 'errno' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/stat.cpython-35.pyc matches /usr/lib/python3.5/stat.py
# code object from '/usr/lib/python3.5/__pycache__/stat.cpython-35.pyc'
import '_stat' # <class '_frozen_importlib.BuiltinImporter'>
import 'stat' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dd57f0>
# /usr/lib/python3.5/__pycache__/posixpath.cpython-35.pyc matches /usr/lib/python3.5/posixpath.py
# code object from '/usr/lib/python3.5/__pycache__/posixpath.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/genericpath.cpython-35.pyc matches /usr/lib/python3.5/genericpath.py
# code object from '/usr/lib/python3.5/__pycache__/genericpath.cpython-35.pyc'
import 'genericpath' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798de00b8>
import 'posixpath' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dd5b38>
# /usr/lib/python3.5/__pycache__/_collections_abc.cpython-35.pyc matches /usr/lib/python3.5/_collections_abc.py
# code object from '/usr/lib/python3.5/__pycache__/_collections_abc.cpython-35.pyc'
import '_collections_abc' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798de0710>
import 'os' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e3ff98>
# /usr/lib/python3.5/__pycache__/_sitebuiltins.cpython-35.pyc matches /usr/lib/python3.5/_sitebuiltins.py
# code object from '/usr/lib/python3.5/__pycache__/_sitebuiltins.cpython-35.pyc'
import '_sitebuiltins' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e452b0>
# /usr/lib/python3.5/__pycache__/sysconfig.cpython-35.pyc matches /usr/lib/python3.5/sysconfig.py
# code object from '/usr/lib/python3.5/__pycache__/sysconfig.cpython-35.pyc'
import 'sysconfig' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e11e80>
# /usr/lib/python3.5/__pycache__/_sysconfigdata.cpython-35.pyc matches /usr/lib/python3.5/_sysconfigdata.py
# code object from '/usr/lib/python3.5/__pycache__/_sysconfigdata.cpython-35.pyc'
# /usr/lib/python3.5/plat-x86_64-linux-gnu/__pycache__/_sysconfigdata_m.cpython-35.pyc matches /usr/lib/python3.5/plat-x86_64-linux-gnu/_sysconfigdata_m.py
# code object from '/usr/lib/python3.5/plat-x86_64-linux-gnu/__pycache__/_sysconfigdata_m.cpython-35.pyc'
import '_sysconfigdata_m' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d9e9b0>
import '_sysconfigdata' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d9e5c0>
# /usr/lib/python3.5/__pycache__/_bootlocale.cpython-35.pyc matches /usr/lib/python3.5/_bootlocale.py
# code object from '/usr/lib/python3.5/__pycache__/_bootlocale.cpython-35.pyc'
import '_locale' # <class '_frozen_importlib.BuiltinImporter'>
import '_bootlocale' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dada58>
# /usr/lib/python3.5/__pycache__/types.cpython-35.pyc matches /usr/lib/python3.5/types.py
# code object from '/usr/lib/python3.5/__pycache__/types.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/functools.cpython-35.pyc matches /usr/lib/python3.5/functools.py
# code object from '/usr/lib/python3.5/__pycache__/functools.cpython-35.pyc'
import '_functools' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/collections/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/collections/__init__.py
# code object from '/usr/lib/python3.5/collections/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/operator.cpython-35.pyc matches /usr/lib/python3.5/operator.py
# code object from '/usr/lib/python3.5/__pycache__/operator.cpython-35.pyc'
import '_operator' # <class '_frozen_importlib.BuiltinImporter'>
import 'operator' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797893eb8>
# /usr/lib/python3.5/__pycache__/keyword.cpython-35.pyc matches /usr/lib/python3.5/keyword.py
# code object from '/usr/lib/python3.5/__pycache__/keyword.cpython-35.pyc'
import 'keyword' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77978a5208>
# /usr/lib/python3.5/__pycache__/heapq.cpython-35.pyc matches /usr/lib/python3.5/heapq.py
# code object from '/usr/lib/python3.5/__pycache__/heapq.cpython-35.pyc'
import '_heapq' # <class '_frozen_importlib.BuiltinImporter'>
import 'heapq' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77978a5a90>
import 'itertools' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/reprlib.cpython-35.pyc matches /usr/lib/python3.5/reprlib.py
# code object from '/usr/lib/python3.5/__pycache__/reprlib.cpython-35.pyc'
import 'reprlib' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77978a5f28>
import '_collections' # <class '_frozen_importlib.BuiltinImporter'>
import 'collections' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dc6940>
# /usr/lib/python3.5/__pycache__/weakref.cpython-35.pyc matches /usr/lib/python3.5/weakref.py
# code object from '/usr/lib/python3.5/__pycache__/weakref.cpython-35.pyc'
import 'weakref' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77978a9b00>
import 'functools' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798db9630>
# /usr/lib/python3.5/collections/__pycache__/abc.cpython-35.pyc matches /usr/lib/python3.5/collections/abc.py
# code object from '/usr/lib/python3.5/collections/__pycache__/abc.cpython-35.pyc'
import 'collections.abc' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dbd5f8>
import 'types' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798db59b0>
# /usr/lib/python3.5/importlib/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/importlib/__init__.py
# code object from '/usr/lib/python3.5/importlib/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/warnings.cpython-35.pyc matches /usr/lib/python3.5/warnings.py
# code object from '/usr/lib/python3.5/__pycache__/warnings.cpython-35.pyc'
import 'warnings' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798dbde10>
import 'importlib' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798db5d68>
# /usr/lib/python3.5/importlib/__pycache__/util.cpython-35.pyc matches /usr/lib/python3.5/importlib/util.py
# code object from '/usr/lib/python3.5/importlib/__pycache__/util.cpython-35.pyc'
# /usr/lib/python3.5/importlib/__pycache__/abc.cpython-35.pyc matches /usr/lib/python3.5/importlib/abc.py
# code object from '/usr/lib/python3.5/importlib/__pycache__/abc.cpython-35.pyc'
# /usr/lib/python3.5/importlib/__pycache__/machinery.cpython-35.pyc matches /usr/lib/python3.5/importlib/machinery.py
# code object from '/usr/lib/python3.5/importlib/__pycache__/machinery.cpython-35.pyc'
import 'importlib.machinery' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797854748>
import 'importlib.abc' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797854128>
# /usr/lib/python3.5/__pycache__/contextlib.cpython-35.pyc matches /usr/lib/python3.5/contextlib.py
# code object from '/usr/lib/python3.5/__pycache__/contextlib.cpython-35.pyc'
import 'contextlib' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779785d400>
import 'importlib.util' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779784aac8>
# possible namespace for /usr/local/lib/python3.5/dist-packages/mpl_toolkits
# possible namespace for /usr/local/lib/python3.5/dist-packages/mpl_toolkits
# destroy mpl_toolkits
# /usr/lib/python3.5/__pycache__/sitecustomize.cpython-35.pyc matches /usr/lib/python3.5/sitecustomize.py
# code object from '/usr/lib/python3.5/__pycache__/sitecustomize.cpython-35.pyc'
# /usr/lib/python3/dist-packages/__pycache__/apport_python_hook.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport_python_hook.py
# code object from '/usr/lib/python3/dist-packages/__pycache__/apport_python_hook.cpython-35.pyc'
import 'apport_python_hook' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779786c240>
import 'sitecustomize' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797866518>
import 'site' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798e39a90>
Python 3.5.2 (default, Nov 23 2017, 16:37:01)
[GCC 5.4.0 20160609] on linux
Type "help", "copyright", "credits" or "license" for more information.
# extension module 'readline' loaded from '/usr/lib/python3.5/lib-dynload/readline.cpython-35m-x86_64-linux-gnu.so'
# extension module 'readline' executed from '/usr/lib/python3.5/lib-dynload/readline.cpython-35m-x86_64-linux-gnu.so'
import 'readline' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f779786c748>
import 'atexit' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/rlcompleter.cpython-35.pyc matches /usr/lib/python3.5/rlcompleter.py
# code object from '/usr/lib/python3.5/__pycache__/rlcompleter.cpython-35.pyc'
import 'rlcompleter' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779786c860>
>>> clear
# /usr/lib/python3.5/__pycache__/re.cpython-35.pyc matches /usr/lib/python3.5/re.py
# code object from '/usr/lib/python3.5/__pycache__/re.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/sre_compile.cpython-35.pyc matches /usr/lib/python3.5/sre_compile.py
# code object from '/usr/lib/python3.5/__pycache__/sre_compile.cpython-35.pyc'
import '_sre' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/sre_parse.cpython-35.pyc matches /usr/lib/python3.5/sre_parse.py
# code object from '/usr/lib/python3.5/__pycache__/sre_parse.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/sre_constants.cpython-35.pyc matches /usr/lib/python3.5/sre_constants.py
# code object from '/usr/lib/python3.5/__pycache__/sre_constants.cpython-35.pyc'
import 'sre_constants' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797160048>
import 'sre_parse' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779787a860>
import 'sre_compile' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797876908>
# /usr/lib/python3.5/__pycache__/copyreg.cpython-35.pyc matches /usr/lib/python3.5/copyreg.py
# code object from '/usr/lib/python3.5/__pycache__/copyreg.cpython-35.pyc'
import 'copyreg' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77971690f0>
import 're' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779786cbe0>
# /usr/lib/python3.5/__pycache__/traceback.cpython-35.pyc matches /usr/lib/python3.5/traceback.py
# code object from '/usr/lib/python3.5/__pycache__/traceback.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/linecache.cpython-35.pyc matches /usr/lib/python3.5/linecache.py
# code object from '/usr/lib/python3.5/__pycache__/linecache.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/tokenize.cpython-35.pyc matches /usr/lib/python3.5/tokenize.py
# code object from '/usr/lib/python3.5/__pycache__/tokenize.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/token.cpython-35.pyc matches /usr/lib/python3.5/token.py
# code object from '/usr/lib/python3.5/__pycache__/token.cpython-35.pyc'
import 'token' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779717d978>
import 'tokenize' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77971734e0>
import 'linecache' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77971732e8>
import 'traceback' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797169550>
# /usr/lib/python3/dist-packages/apport/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport/__init__.py
# code object from '/usr/lib/python3/dist-packages/apport/__pycache__/__init__.cpython-35.pyc'
import 'time' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3/dist-packages/apport/__pycache__/report.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport/report.py
# code object from '/usr/lib/python3/dist-packages/apport/__pycache__/report.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/subprocess.cpython-35.pyc matches /usr/lib/python3.5/subprocess.py
# code object from '/usr/lib/python3.5/__pycache__/subprocess.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/signal.cpython-35.pyc matches /usr/lib/python3.5/signal.py
# code object from '/usr/lib/python3.5/__pycache__/signal.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/enum.cpython-35.pyc matches /usr/lib/python3.5/enum.py
# code object from '/usr/lib/python3.5/__pycache__/enum.cpython-35.pyc'
import 'enum' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779712e898>
import 'signal' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779712e0f0>
import '_posixsubprocess' # <class '_frozen_importlib.BuiltinImporter'>
import 'select' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/selectors.cpython-35.pyc matches /usr/lib/python3.5/selectors.py
# code object from '/usr/lib/python3.5/__pycache__/selectors.cpython-35.pyc'
import 'math' # <class '_frozen_importlib.BuiltinImporter'>
import 'selectors' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797143240>
# /usr/lib/python3.5/__pycache__/threading.cpython-35.pyc matches /usr/lib/python3.5/threading.py
# code object from '/usr/lib/python3.5/__pycache__/threading.cpython-35.pyc'
import 'threading' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779714c4a8>
import 'subprocess' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779711e7f0>
# /usr/lib/python3.5/__pycache__/tempfile.cpython-35.pyc matches /usr/lib/python3.5/tempfile.py
# code object from '/usr/lib/python3.5/__pycache__/tempfile.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/shutil.cpython-35.pyc matches /usr/lib/python3.5/shutil.py
# code object from '/usr/lib/python3.5/__pycache__/shutil.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/fnmatch.cpython-35.pyc matches /usr/lib/python3.5/fnmatch.py
# code object from '/usr/lib/python3.5/__pycache__/fnmatch.cpython-35.pyc'
import 'fnmatch' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d78a20>
# /usr/lib/python3.5/__pycache__/tarfile.cpython-35.pyc matches /usr/lib/python3.5/tarfile.py
# code object from '/usr/lib/python3.5/__pycache__/tarfile.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/struct.cpython-35.pyc matches /usr/lib/python3.5/struct.py
# code object from '/usr/lib/python3.5/__pycache__/struct.cpython-35.pyc'
import '_struct' # <class '_frozen_importlib.BuiltinImporter'>
import 'struct' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797088630>
# /usr/lib/python3.5/__pycache__/copy.cpython-35.pyc matches /usr/lib/python3.5/copy.py
# code object from '/usr/lib/python3.5/__pycache__/copy.cpython-35.pyc'
import 'copy' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797088940>
import 'grp' # <class '_frozen_importlib.BuiltinImporter'>
import 'pwd' # <class '_frozen_importlib.BuiltinImporter'>
import 'tarfile' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d78dd8>
# /usr/lib/python3.5/__pycache__/bz2.cpython-35.pyc matches /usr/lib/python3.5/bz2.py
# code object from '/usr/lib/python3.5/__pycache__/bz2.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/_compression.cpython-35.pyc matches /usr/lib/python3.5/_compression.py
# code object from '/usr/lib/python3.5/__pycache__/_compression.cpython-35.pyc'
import '_compression' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797090d30>
# extension module '_bz2' loaded from '/usr/lib/python3.5/lib-dynload/_bz2.cpython-35m-x86_64-linux-gnu.so'
# extension module '_bz2' executed from '/usr/lib/python3.5/lib-dynload/_bz2.cpython-35m-x86_64-linux-gnu.so'
import '_bz2' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f77970a2668>
import 'bz2' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d801d0>
# /usr/lib/python3.5/__pycache__/lzma.cpython-35.pyc matches /usr/lib/python3.5/lzma.py
# code object from '/usr/lib/python3.5/__pycache__/lzma.cpython-35.pyc'
# extension module '_lzma' loaded from '/usr/lib/python3.5/lib-dynload/_lzma.cpython-35m-x86_64-linux-gnu.so'
# extension module '_lzma' executed from '/usr/lib/python3.5/lib-dynload/_lzma.cpython-35m-x86_64-linux-gnu.so'
import '_lzma' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f77970a91d0>
import 'lzma' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77970a2940>
import 'shutil' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d6ce80>
# /usr/lib/python3.5/__pycache__/random.cpython-35.pyc matches /usr/lib/python3.5/random.py
# code object from '/usr/lib/python3.5/__pycache__/random.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/hashlib.cpython-35.pyc matches /usr/lib/python3.5/hashlib.py
# code object from '/usr/lib/python3.5/__pycache__/hashlib.cpython-35.pyc'
# extension module '_hashlib' loaded from '/usr/lib/python3.5/lib-dynload/_hashlib.cpython-35m-x86_64-linux-gnu.so'
# extension module '_hashlib' executed from '/usr/lib/python3.5/lib-dynload/_hashlib.cpython-35m-x86_64-linux-gnu.so'
import '_hashlib' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f77970b8a20>
import 'hashlib' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77970b2f60>
import '_random' # <class '_frozen_importlib.BuiltinImporter'>
import 'random' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7798d6cf60>
import 'tempfile' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779711e748>
# /usr/lib/python3.5/__pycache__/glob.cpython-35.pyc matches /usr/lib/python3.5/glob.py
# code object from '/usr/lib/python3.5/__pycache__/glob.cpython-35.pyc'
import 'glob' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77970b8588>
# /usr/lib/python3.5/__pycache__/locale.cpython-35.pyc matches /usr/lib/python3.5/locale.py
# code object from '/usr/lib/python3.5/__pycache__/locale.cpython-35.pyc'
import 'locale' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77967ff128>
# /usr/lib/python3.5/__pycache__/imp.cpython-35.pyc matches /usr/lib/python3.5/imp.py
# code object from '/usr/lib/python3.5/__pycache__/imp.cpython-35.pyc'
import 'imp' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779681a0f0>
# /usr/lib/python3.5/xml/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/xml/__init__.py
# code object from '/usr/lib/python3.5/xml/__pycache__/__init__.cpython-35.pyc'
import 'xml' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779681a9e8>
# /usr/lib/python3.5/xml/dom/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/__init__.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/xml/dom/__pycache__/domreg.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/domreg.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/domreg.cpython-35.pyc'
import 'xml.dom.domreg' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77968235f8>
import 'xml.dom' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779681ac50>
# /usr/lib/python3.5/xml/dom/__pycache__/minidom.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/minidom.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/minidom.cpython-35.pyc'
# /usr/lib/python3.5/xml/dom/__pycache__/minicompat.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/minicompat.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/minicompat.cpython-35.pyc'
import 'xml.dom.minicompat' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779617b7b8>
# /usr/lib/python3.5/xml/dom/__pycache__/xmlbuilder.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/xmlbuilder.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/xmlbuilder.cpython-35.pyc'
# /usr/lib/python3.5/xml/dom/__pycache__/NodeFilter.cpython-35.pyc matches /usr/lib/python3.5/xml/dom/NodeFilter.py
# code object from '/usr/lib/python3.5/xml/dom/__pycache__/NodeFilter.cpython-35.pyc'
import 'xml.dom.NodeFilter' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779618e710>
import 'xml.dom.xmlbuilder' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779617bc18>
import 'xml.dom.minidom' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779681acf8>
# /usr/lib/python3.5/xml/parsers/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/xml/parsers/__init__.py
# code object from '/usr/lib/python3.5/xml/parsers/__pycache__/__init__.cpython-35.pyc'
import 'xml.parsers' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779618efd0>
# /usr/lib/python3.5/xml/parsers/__pycache__/expat.cpython-35.pyc matches /usr/lib/python3.5/xml/parsers/expat.py
# code object from '/usr/lib/python3.5/xml/parsers/__pycache__/expat.cpython-35.pyc'
import 'pyexpat' # <class '_frozen_importlib.BuiltinImporter'>
import 'xml.parsers.expat' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961a50f0>
# /usr/lib/python3.5/urllib/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/urllib/__init__.py
# code object from '/usr/lib/python3.5/urllib/__pycache__/__init__.cpython-35.pyc'
import 'urllib' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961a5470>
# /usr/lib/python3.5/urllib/__pycache__/error.cpython-35.pyc matches /usr/lib/python3.5/urllib/error.py
# code object from '/usr/lib/python3.5/urllib/__pycache__/error.cpython-35.pyc'
# /usr/lib/python3.5/urllib/__pycache__/response.cpython-35.pyc matches /usr/lib/python3.5/urllib/response.py
# code object from '/usr/lib/python3.5/urllib/__pycache__/response.cpython-35.pyc'
import 'urllib.response' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961a5a20>
import 'urllib.error' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961a5550>
# /usr/lib/python3.5/urllib/__pycache__/request.cpython-35.pyc matches /usr/lib/python3.5/urllib/request.py
# code object from '/usr/lib/python3.5/urllib/__pycache__/request.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/base64.cpython-35.pyc matches /usr/lib/python3.5/base64.py
# code object from '/usr/lib/python3.5/__pycache__/base64.cpython-35.pyc'
import 'binascii' # <class '_frozen_importlib.BuiltinImporter'>
import 'base64' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779614e7f0>
# /usr/lib/python3.5/__pycache__/bisect.cpython-35.pyc matches /usr/lib/python3.5/bisect.py
# code object from '/usr/lib/python3.5/__pycache__/bisect.cpython-35.pyc'
import '_bisect' # <class '_frozen_importlib.BuiltinImporter'>
import 'bisect' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796153908>
# /usr/lib/python3.5/email/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/email/__init__.py
# code object from '/usr/lib/python3.5/email/__pycache__/__init__.cpython-35.pyc'
import 'email' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961538d0>
# /usr/lib/python3.5/http/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/http/__init__.py
# code object from '/usr/lib/python3.5/http/__pycache__/__init__.cpython-35.pyc'
import 'http' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796153cf8>
# /usr/lib/python3.5/http/__pycache__/client.cpython-35.pyc matches /usr/lib/python3.5/http/client.py
# code object from '/usr/lib/python3.5/http/__pycache__/client.cpython-35.pyc'
# /usr/lib/python3.5/email/__pycache__/parser.cpython-35.pyc matches /usr/lib/python3.5/email/parser.py
# code object from '/usr/lib/python3.5/email/__pycache__/parser.cpython-35.pyc'
# /usr/lib/python3.5/email/__pycache__/feedparser.cpython-35.pyc matches /usr/lib/python3.5/email/feedparser.py
# code object from '/usr/lib/python3.5/email/__pycache__/feedparser.cpython-35.pyc'
# /usr/lib/python3.5/email/__pycache__/errors.cpython-35.pyc matches /usr/lib/python3.5/email/errors.py
# code object from '/usr/lib/python3.5/email/__pycache__/errors.cpython-35.pyc'
import 'email.errors' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960f79e8>
# /usr/lib/python3.5/email/__pycache__/message.cpython-35.pyc matches /usr/lib/python3.5/email/message.py
# code object from '/usr/lib/python3.5/email/__pycache__/message.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/uu.cpython-35.pyc matches /usr/lib/python3.5/uu.py
# code object from '/usr/lib/python3.5/__pycache__/uu.cpython-35.pyc'
import 'uu' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796116198>
# /usr/lib/python3.5/__pycache__/quopri.cpython-35.pyc matches /usr/lib/python3.5/quopri.py
# code object from '/usr/lib/python3.5/__pycache__/quopri.cpython-35.pyc'
import 'quopri' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961162e8>
# /usr/lib/python3.5/email/__pycache__/utils.cpython-35.pyc matches /usr/lib/python3.5/email/utils.py
# code object from '/usr/lib/python3.5/email/__pycache__/utils.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/socket.cpython-35.pyc matches /usr/lib/python3.5/socket.py
# code object from '/usr/lib/python3.5/__pycache__/socket.cpython-35.pyc'
import '_socket' # <class '_frozen_importlib.BuiltinImporter'>
import 'socket' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779611e978>
# /usr/lib/python3.5/__pycache__/datetime.cpython-35.pyc matches /usr/lib/python3.5/datetime.py
# code object from '/usr/lib/python3.5/__pycache__/datetime.cpython-35.pyc'
import '_datetime' # <class '_frozen_importlib.BuiltinImporter'>
import 'datetime' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779611ef60>
# /usr/lib/python3.5/urllib/__pycache__/parse.cpython-35.pyc matches /usr/lib/python3.5/urllib/parse.py
# code object from '/usr/lib/python3.5/urllib/__pycache__/parse.cpython-35.pyc'
import 'urllib.parse' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796129cf8>
# /usr/lib/python3.5/email/__pycache__/_parseaddr.cpython-35.pyc matches /usr/lib/python3.5/email/_parseaddr.py
# code object from '/usr/lib/python3.5/email/__pycache__/_parseaddr.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/calendar.cpython-35.pyc matches /usr/lib/python3.5/calendar.py
# code object from '/usr/lib/python3.5/__pycache__/calendar.cpython-35.pyc'
import 'calendar' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960e2b38>
import 'email._parseaddr' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960e0208>
# /usr/lib/python3.5/email/__pycache__/charset.cpython-35.pyc matches /usr/lib/python3.5/email/charset.py
# code object from '/usr/lib/python3.5/email/__pycache__/charset.cpython-35.pyc'
# /usr/lib/python3.5/email/__pycache__/base64mime.cpython-35.pyc matches /usr/lib/python3.5/email/base64mime.py
# code object from '/usr/lib/python3.5/email/__pycache__/base64mime.cpython-35.pyc'
import 'email.base64mime' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779608a668>
# /usr/lib/python3.5/email/__pycache__/quoprimime.cpython-35.pyc matches /usr/lib/python3.5/email/quoprimime.py
# code object from '/usr/lib/python3.5/email/__pycache__/quoprimime.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/string.cpython-35.pyc matches /usr/lib/python3.5/string.py
# code object from '/usr/lib/python3.5/__pycache__/string.cpython-35.pyc'
import '_string' # <class '_frozen_importlib.BuiltinImporter'>
import 'string' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779608af60>
import 'email.quoprimime' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779608a898>
# /usr/lib/python3.5/email/__pycache__/encoders.cpython-35.pyc matches /usr/lib/python3.5/email/encoders.py
# code object from '/usr/lib/python3.5/email/__pycache__/encoders.cpython-35.pyc'
import 'email.encoders' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779609d128>
import 'email.charset' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779607fac8>
import 'email.utils' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961168d0>
# /usr/lib/python3.5/email/__pycache__/_policybase.cpython-35.pyc matches /usr/lib/python3.5/email/_policybase.py
# code object from '/usr/lib/python3.5/email/__pycache__/_policybase.cpython-35.pyc'
# /usr/lib/python3.5/email/__pycache__/header.cpython-35.pyc matches /usr/lib/python3.5/email/header.py
# code object from '/usr/lib/python3.5/email/__pycache__/header.cpython-35.pyc'
import 'email.header' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779609da20>
import 'email._policybase' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779611e828>
# /usr/lib/python3.5/email/__pycache__/_encoded_words.cpython-35.pyc matches /usr/lib/python3.5/email/_encoded_words.py
# code object from '/usr/lib/python3.5/email/__pycache__/_encoded_words.cpython-35.pyc'
import 'email._encoded_words' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960a9b38>
# /usr/lib/python3.5/email/__pycache__/iterators.cpython-35.pyc matches /usr/lib/python3.5/email/iterators.py
# code object from '/usr/lib/python3.5/email/__pycache__/iterators.cpython-35.pyc'
import 'email.iterators' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796033240>
import 'email.message' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960f7b00>
import 'email.feedparser' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796169c50>
import 'email.parser' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796169860>
# /usr/lib/python3.5/__pycache__/ssl.cpython-35.pyc matches /usr/lib/python3.5/ssl.py
# code object from '/usr/lib/python3.5/__pycache__/ssl.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/ipaddress.cpython-35.pyc matches /usr/lib/python3.5/ipaddress.py
# code object from '/usr/lib/python3.5/__pycache__/ipaddress.cpython-35.pyc'
import 'ipaddress' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796044780>
# /usr/lib/python3.5/__pycache__/textwrap.cpython-35.pyc matches /usr/lib/python3.5/textwrap.py
# code object from '/usr/lib/python3.5/__pycache__/textwrap.cpython-35.pyc'
import 'textwrap' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796061cf8>
# extension module '_ssl' loaded from '/usr/lib/python3.5/lib-dynload/_ssl.cpython-35m-x86_64-linux-gnu.so'
# extension module '_ssl' executed from '/usr/lib/python3.5/lib-dynload/_ssl.cpython-35m-x86_64-linux-gnu.so'
import '_ssl' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f77960b1da0>
import 'ssl' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77960336d8>
import 'http.client' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779615e160>
import 'urllib.request' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77961ab2e8>
# /usr/lib/python3/dist-packages/__pycache__/problem_report.cpython-35.pyc matches /usr/lib/python3/dist-packages/problem_report.py
# code object from '/usr/lib/python3/dist-packages/__pycache__/problem_report.cpython-35.pyc'
import 'zlib' # <class '_frozen_importlib.BuiltinImporter'>
# /usr/lib/python3.5/__pycache__/gzip.cpython-35.pyc matches /usr/lib/python3.5/gzip.py
# code object from '/usr/lib/python3.5/__pycache__/gzip.cpython-35.pyc'
import 'gzip' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795ff8d30>
# /usr/lib/python3.5/email/mime/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/email/mime/__init__.py
# code object from '/usr/lib/python3.5/email/mime/__pycache__/__init__.cpython-35.pyc'
import 'email.mime' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7796012f28>
# /usr/lib/python3.5/email/mime/__pycache__/multipart.cpython-35.pyc matches /usr/lib/python3.5/email/mime/multipart.py
# code object from '/usr/lib/python3.5/email/mime/__pycache__/multipart.cpython-35.pyc'
# /usr/lib/python3.5/email/mime/__pycache__/base.cpython-35.pyc matches /usr/lib/python3.5/email/mime/base.py
# code object from '/usr/lib/python3.5/email/mime/__pycache__/base.cpython-35.pyc'
import 'email.mime.base' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601b1d0>
import 'email.mime.multipart' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601b080>
# /usr/lib/python3.5/email/mime/__pycache__/text.cpython-35.pyc matches /usr/lib/python3.5/email/mime/text.py
# code object from '/usr/lib/python3.5/email/mime/__pycache__/text.cpython-35.pyc'
# /usr/lib/python3.5/email/mime/__pycache__/nonmultipart.cpython-35.pyc matches /usr/lib/python3.5/email/mime/nonmultipart.py
# code object from '/usr/lib/python3.5/email/mime/__pycache__/nonmultipart.cpython-35.pyc'
import 'email.mime.nonmultipart' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601b390>
import 'email.mime.text' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601b198>
import 'problem_report' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779614e0b8>
# /usr/lib/python3/dist-packages/apport/__pycache__/fileutils.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport/fileutils.py
# code object from '/usr/lib/python3/dist-packages/apport/__pycache__/fileutils.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/configparser.cpython-35.pyc matches /usr/lib/python3.5/configparser.py
# code object from '/usr/lib/python3.5/__pycache__/configparser.cpython-35.pyc'
import 'configparser' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601beb8>
# /usr/lib/python3/dist-packages/apport/__pycache__/packaging_impl.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport/packaging_impl.py
# code object from '/usr/lib/python3/dist-packages/apport/__pycache__/packaging_impl.cpython-35.pyc'
# /usr/lib/python3.5/json/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3.5/json/__init__.py
# code object from '/usr/lib/python3.5/json/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/json/__pycache__/decoder.cpython-35.pyc matches /usr/lib/python3.5/json/decoder.py
# code object from '/usr/lib/python3.5/json/__pycache__/decoder.cpython-35.pyc'
# /usr/lib/python3.5/json/__pycache__/scanner.cpython-35.pyc matches /usr/lib/python3.5/json/scanner.py
# code object from '/usr/lib/python3.5/json/__pycache__/scanner.cpython-35.pyc'
# extension module '_json' loaded from '/usr/lib/python3.5/lib-dynload/_json.cpython-35m-x86_64-linux-gnu.so'
# extension module '_json' executed from '/usr/lib/python3.5/lib-dynload/_json.cpython-35m-x86_64-linux-gnu.so'
import '_json' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f7795b4c7b8>
import 'json.scanner' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b4c470>
import 'json.decoder' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b46d68>
# /usr/lib/python3.5/json/__pycache__/encoder.cpython-35.pyc matches /usr/lib/python3.5/json/encoder.py
# code object from '/usr/lib/python3.5/json/__pycache__/encoder.cpython-35.pyc'
import 'json.encoder' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b4c2e8>
import 'json' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b46ac8>
# /usr/lib/python3/dist-packages/apt/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/__init__.py
# code object from '/usr/lib/python3/dist-packages/apt/__pycache__/__init__.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/__future__.cpython-35.pyc matches /usr/lib/python3.5/__future__.py
# code object from '/usr/lib/python3.5/__pycache__/__future__.cpython-35.pyc'
import '__future__' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b57978>
# extension module 'apt_pkg' loaded from '/usr/lib/python3/dist-packages/apt_pkg.cpython-35m-x86_64-linux-gnu.so'
# extension module 'apt_pkg' executed from '/usr/lib/python3/dist-packages/apt_pkg.cpython-35m-x86_64-linux-gnu.so'
import 'apt_pkg' # <_frozen_importlib_external.ExtensionFileLoader object at 0x7f7795b57e10>
# /usr/lib/python3/dist-packages/apt/__pycache__/package.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/package.py
# code object from '/usr/lib/python3/dist-packages/apt/__pycache__/package.cpython-35.pyc'
# /usr/lib/python3/dist-packages/apt/progress/__pycache__/__init__.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/progress/__init__.py
# code object from '/usr/lib/python3/dist-packages/apt/progress/__pycache__/__init__.cpython-35.pyc'
import 'apt.progress' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7794964a58>
# /usr/lib/python3/dist-packages/apt/progress/__pycache__/text.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/progress/text.py
# code object from '/usr/lib/python3/dist-packages/apt/progress/__pycache__/text.cpython-35.pyc'
# /usr/lib/python3/dist-packages/apt/progress/__pycache__/base.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/progress/base.py
# code object from '/usr/lib/python3/dist-packages/apt/progress/__pycache__/base.cpython-35.pyc'
import 'fcntl' # <class '_frozen_importlib.BuiltinImporter'>
import 'apt.progress.base' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779496b5c0>
import 'apt.progress.text' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7794964be0>
import 'apt.package' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779494b550>
# /usr/lib/python3/dist-packages/apt/__pycache__/cache.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/cache.py
# code object from '/usr/lib/python3/dist-packages/apt/__pycache__/cache.cpython-35.pyc'
import 'apt.cache' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779495f588>
# /usr/lib/python3/dist-packages/apt/__pycache__/cdrom.cpython-35.pyc matches /usr/lib/python3/dist-packages/apt/cdrom.py
# code object from '/usr/lib/python3/dist-packages/apt/__pycache__/cdrom.cpython-35.pyc'
import 'apt.cdrom' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7794982b38>
import 'apt' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b577b8>
# /usr/lib/python3.5/__pycache__/pickle.cpython-35.pyc matches /usr/lib/python3.5/pickle.py
# code object from '/usr/lib/python3.5/__pycache__/pickle.cpython-35.pyc'
# /usr/lib/python3.5/__pycache__/_compat_pickle.cpython-35.pyc matches /usr/lib/python3.5/_compat_pickle.py
# code object from '/usr/lib/python3.5/__pycache__/_compat_pickle.cpython-35.pyc'
import '_compat_pickle' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77970eee10>
import '_pickle' # <class '_frozen_importlib.BuiltinImporter'>
import 'pickle' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b57860>
# /usr/lib/python3/dist-packages/apport/__pycache__/packaging.cpython-35.pyc matches /usr/lib/python3/dist-packages/apport/packaging.py
# code object from '/usr/lib/python3/dist-packages/apport/__pycache__/packaging.cpython-35.pyc'
import 'apport.packaging' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77970eeba8>
import 'apport.packaging_impl' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7795b35be0>
import 'apport.fileutils' # <_frozen_importlib_external.SourceFileLoader object at 0x7f779601b5f8>
import 'apport.report' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797185c88>
# /usr/lib/python3.5/__pycache__/gettext.cpython-35.pyc matches /usr/lib/python3.5/gettext.py
# code object from '/usr/lib/python3.5/__pycache__/gettext.cpython-35.pyc'
import 'gettext' # <_frozen_importlib_external.SourceFileLoader object at 0x7f7797100518>
import 'apport' # <_frozen_importlib_external.SourceFileLoader object at 0x7f77971790f0>
Traceback (most recent call last):
File "", line 1, in
NameError: name 'clear' is not defined

Neelam[Val] vi ~/.bashrc []