Bulbul |
I wanted to remove the duplicates from fastq file. I planned to use fastuniq but it does not have good tutorial. Can you please tell me how to use it? http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0052249 |
Bulbul |
Looking for files named in data ...Pushing back filename: "clean_a2017.R1.fq" |
Bulbul |
make[3]: Entering directory '/home/dept/Tools/amos-3.1.0/src/Align' |
Bulbul |
Using breakdancer the output consists of DEL, INV, INS, CTX and ITX. Using following commands: bam2cfg.pl -g -h dis.bam normal.bam > config_file.cfg the 11th output column should displays the amount of reads supporting the called SV per bam-file. I have some unusual research in 11th column, can you please helpme to fix it. |