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REAPR: a universal tool for genome assembly evaluation
By Jitendra Prajapati 3719 days ago Comments (1)genomebiology.biomedcentral.com - REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome for comparison. It can be used in any stage of an assembly pipeline to automatically break incorrect scaffolds and...MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
By Neel 3675 days agojournals.plos.org - MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align reads generated by all the major sequencing technologies,...Maq: Mapping and Assembly with Quality
By Jit 3490 days agomaq.sourceforge.net - Maq stands for Mapping and Assembly with Quality It builds assembly by mapping short reads to reference sequences. Maq is a project hosted by SourceForge.net. The project page is available athttp://sourceforge.net/projects/maq/....Five unique traits of effective computational biologist
By Jitendra Narayan 4720 days ago Comments (3)Traits of biological programmersThe Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @...STUDENTSHIP and TRAINEESHIP @ University of Madras
Bioinformatics Infrastructure Facility University of Madras Chennai 600 025 Applications are invited for the STUDENTSHIP and TRAINEESHIP vacancies to carry out project/research work in the DBT - Bioinformatics Infrastructure Facility with...Five points for bioinformatics software/tools
By Jitendra Narayan 4695 days ago Comments (1)Some five points to keep in mind for bioinformatics software/toolsPrime Minister’s 100k Genome Project
By Jitendra Narayan 4692 days agoDNA code of 100,000 patients over the next five years
Computational Biology in the 21st Century: Making Sense out of Massive Data
By Poonam Mahapatra 4671 days agoComputational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 01, 2012, 3:00:00 PM Category: Wednesday Afternoon Lectures Description: The last two decades have seen an exponential increase...
