Rahul Nayak
A Bioinformatician
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NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data
By Jit 2983 days agogithub.com - NextSV, a meta SV caller and a computational pipeline to perform SV calling from low coverage long-read sequencing data. NextSV integrates three aligners and three SV callers and generates two integrated call sets (sensitive/stringent) for different...Scientist at Regional Medical Research Centre (ICMR), RMRC, Port Blair
Scientist Eligibility : MSc, M Phil / Phd, BE/B.Tech Location : Delhi Last Date : 08 Mar 2016 Hiring Process : Walk - In Regional Medical Research Centre - Notification Order No.1-51/Proj/RMRC/PB/ Scientist – II (Post Code:...Indexcov: fast coverage quality control for whole-genome sequencing
By Jit 2961 days ago Comments (1)github.com - indexcov, an efficient estimator of whole-genome sequencing coverage to rapidly identify samples with aberrant coverage profiles, reveal large-scale chromosomal anomalies, recognize potential batch effects, and infer the sex of a...lordFAST: sensitive and Fast Alignment Search Tool for LOng noisy Read sequencing Data
By BioJoker 2871 days agogithub.com - lordFAST is a sensitive tool for mapping long reads with high error rates. lordFAST is specially designed for aligning reads from PacBio sequencing technology but provides the user the ability to change alignment parameters depending on the reads...JRF at ICGEB
Vacancy Notice PU/TS/01-16 JRF jobs in International Centre for Genetic Engineering and Biotechnology Area of research: Computational analysis of protein-protein interactions and metabolic reconstruction of pathways Qualification : Suitable...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Rahul Nayak 2650 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
By Jit 2444 days agobioinfo.ut.ee - FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the...Post-Doctoral Fellow Jobs opportunity in SRM University
Post-Doctoral Fellow Jobs opportunity in SRM University Essential qualification : Ph.D. in Bioinformatics/Biotechnology/Genetics/Computational Biology.Understanding of genomics data and advanced knowledge of Java, and C/C++ as the programming...FastProNGS: fast preprocessing of next-generation sequencing reads
By Rahul Nayak 2111 days agogithub.com - FastProNGS to integrate the quality control process with automatic adapter removal. Parallel processing was implemented to speed up the process by allocating multiple threads. Compared with similar up-to-date preprocessing tools, FastProNGS is by...SRF at NRCPB, New Deslhi
NRCPB Recruitment 2016 – Walk in for SRF & Young Professional Posts: National Research Centre on Plant Biotechnology (NRCPB) has announced a notification for the recruitment of Senior Research Fellow & Young Professional Scheme vacancies for...
