Rahul Agarwal
I'm a Bioinformatician and Programmer
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GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
By Rahul Agarwal 3430 days ago Comments (1)github.com - GraphMap is a novel mapper targeted at aligning long, error-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d reads with very high sensitivity and accuracy, and also presents a significant...BioCodes/BioScripts
By Jit 3869 days agogithub.com - Over the years most bioinformatics people amass a collection of small utility scripts which make their lives easier. Too often they are kept either in private repositories or as part of a public collection to which noone else can contribute. Biocode...GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
By Abhimanyu Singh 2743 days agogithub.com - GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-generation sequencing assemblies capable of using diverse information sources. GRASS offers a mixed-integer programming formulation of the contig scaffolding problem, which...RA at ALAGAPPA UNIVERSITY
DEPARTMENT OF BIOTECHNOLOGY (UGC SAP and DST-FIST & PURSE Sponsored Department) ALAGAPPA UNIVERSITY (A State University Accredited by NAAC with „A‟ Grade) Karaikudi - 630 004, India WALK IN INTERVIEW A walk-in Interview for the...Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
By Jit 2553 days agoschatzlab.cshl.edu - Monitoring the progress of DNA molecules through a membrane pore has been postulated as a method for sequencing DNA for several decades. Recently, a nanopore-based sequencing instrument, the Oxford Nanopore MinION, has become available that we used...Associate Professor - Bio-Informatics at University of Allahabad in Allahabad
No of vacancies: 01 Pay scale: Pay Band of Rs. 37400-67000 with AGP of Rs. 9000. i. Educational Qualification: Good academic record with a Ph.D. Degree in the concerned/allied/relevant disciplines. ii. A Master's Degree with at least 55%...LRSDAY: Long-read Sequencing Data Analysis for Yeasts
By Poonam Mahapatra 1917 days agogithub.com - Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model organism with small genome size and great biotechnological importance, the budding...DNA Replication Process [3D Animation]
By Rahul Nayak 3852 days agoSee an organised list of all the animations: http://doctorprodigious.wordpress.com/hd-animations/Genobuntu: Package for Next Generation Sequencing and Genome Assembly
By BioStar 1651 days agosourceforge.net - Genobuntu is a software package containing more than 70 software and packages oriented towards NGS. In its current version, Genobuntu supports pre assembly tools, genome assemblers as well as post assembly tools.Commonly used biological software and...Bioinformatics PhD at CUK Kerala
Applications are invited from highly motivated students (UGC-CSIR-JRF) with a background in Genomics/ Biotechnology/ Molecular Microbiology/ Biochemistry and Bioinformatics to pursue research leading to Ph.D. in the following areas; 1. Cancer...
