Priya Singh
A Bioinformatician !!!
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Bioinformatics Technical Position at CDAC Pune - India
CDAC Pune Recruitment 2016 – Apply Online for Technical Positions: Department of Information Technology under the Ministry of Communications and Information Technology, Government of India, Centre for Development of Advanced Computing (C-DAC), Pune...Omega2: metagenome assembly pipeline
By Jit 3379 days agoomega.omicsbio.org - Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...Research Project at IIT, Madras
Two project positions are available to work on (i) molecular modeling and molecular dynamics simulations and (ii) development of bioinformatics databases and tools at Protein Bioinformatics Lab, Department of Biotechnology, IIT Madras. Duration :...RGFA: powerful and convenient handling of assembly graphs
By Rahul Nayak 3180 days ago Comments (1)www.ncbi.nlm.nih.gov - RGFA, an implementation of the proposed GFA specification in Ruby. It allows the user to conveniently parse, edit and write GFA files. Complex operations such as the separation of the implicit instances of repeats and the merging of linear paths can...SRF Bioinformatics job position in National Institute of Plant Genome Research (NIPGR)
SRF Bioinformatics job position in National Institute of Plant Genome Research (NIPGR) Title : “Transcriptome and small RNA diversity analysis of developing seed contrasting rice varieties” Qualification : Candidates having M.Sc./M.Tech. degree...ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole...
By Rahul Nayak 3021 days agogithub.com - ChopStitch is a new method for finding putative exons and constructing splice graphs using an assembled transcriptome and whole genome shotgun sequencing (WGSS) data. ChopStitch identifies exon-exon boundaries in de novo assembled RNA-seq data with...Bioinformatics jobs at Chittaranjan National Cancer Institute
Chittaranjan National Cancer Institute Advertisement No.497/2016 Invites Applications For Senior Scientific Officer, Gr. II Note: Experience in the following field required: Molecular cancer cytogenetic and genetic toxicology Molecular drug...Strudel
By Anjana 3662 days agoics.hutton.ac.uk - Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety of different levels of resolution, from entire maps to individual...Genome assembly forensics: finding the elusive mis-assembly
By Jit 2813 days agoamos.sourceforge.net - We present the first collection of tools aimed at automated genome assembly validation. This work formalizes several mechanisms for detecting mis-assemblies, and describes their implementation in our automated validation pipeline,...StringTie Transcript assembly and quantification for RNA-Seq
By Jit 2314 days agoccb.jhu.edu - StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow algorithm as well as an optional de novo assembly step to assemble and quantitate full-length...
