BOL

Research Associate Bioinformatics recruitment in ICGEB, New Delhi Project :“Genetic Transformation and Development of Elite Transgenic Maize (Zea mays L.) for Biotic and Abiotic Stresses Tolerance”. Qualification: Ph.D. degree...

Senior Manager (Bioinformatics Operations) Rajiv Gandhi Centre for Biotechnology (RGCB) - Thiruvananthapuram, Kerala ₹15,600 - ₹39,100 a month Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications for the following positions from...

omega.omicsbio.org - Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...

github.com - A de novo genome assembly can be summarised b y a number of metrics, including: Overall assembly length Number of scaffolds/contigs Length of longest scaffold/contig Scaffold/contig N50 and N90Assembly base composition, in...

github.com - HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence reads, designed to "just work" with excellent speed and accuracy. We found that previously described haplotype assembly methods are specialized for specific read...

atifrahman.github.io - SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing. Please email your questions, comments, suggestions, and bug reports to...

Advt. No. S/DPB(CB)/17/2016-17 Junior Research Assistant/ Senior Research Assistant Job vacancies in Bose Institute on temporary basis Project Title : “Genome wide transcriptome analysis to identity MYMIV-stress related genomic resources of...

converting a VCF file into a FASTA file given a reference sequence

murasaki.dna.bio.keio.ac.jp - Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU hours (42 wall minutes)) scalable (Arbitrarily parallelizable across multiple...

seq.crg.es - The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall short RNA) expression using short-read deep sequencing data. In its present implementation MIRO is especially adapted for the analysis of...