Neel
Bioinformatics Beginner
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FiNGS: Filters for Next Generation Sequencing
By Neel 1412 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...Junior Research Fellowship at G.B. PANT UNIVERSITY
DEPARTMENT OF MOLECULAR BIOLOGY & GENETIC ENGINEERING COLLEGE OF BASIC SCIENCE AND HUMANITIES G.B. PANT UNIVERSITY OF AGRICULTURE AND TECHNOLOGY PANTNAGAR -263145, UTTARAKHAND No. CBSH/MBGE/356 Subject: Advertisement for the award of...
Libraries or management tools for high throughput sequencing data
Last updated 97 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...Bioinformatics JRF/SRF position at University of Hyderabad
UNIVERSITY OF HYDERABAD SCHOOL OF LIFE SCIENCES Applications are invited from qualified individuals for a JRF/SRF position (sponsored by DBT/DST) at Prof. Jagan Pongubala’s laboratory, University of Hyderabad. Dr. Pongubala’s laboratory is...-
My commonly used commands in Bioinformatics
Last updated 2359 days ago by Rahul NayakFYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta... JRF at Bose Institute, Kolkata
ADVT. No. S/BIC/01/2014-15 Bose Institute, Kolkata, invites applications from Indian Citizens for ONE (01) temporary position of Junior Research Fellow in the DBT sponsored project entitled, “Centre of Excellance (CoE) in Bioinformatics at Bose...NanoPack: visualizing and processing long-read sequencing data
By Jit 2207 days agogithub.com - The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible...Research fellow (PhD candidate) in computational biology – 2 positions
At the Department of Informatics two 4-year positions as research fellow are available in the field of computational biology connected to the Computational Biology Unit. The positions are linked to the project “Integrated genomics - linking...Kevler: Reference-free variant discovery in large eukaryotic genomes
By Jit 1808 days agogithub.com - Welcome to kevlar, software for predicting de novo genetic variants without mapping reads to a reference genome! kevlar's k-mer abundance based method calls single nucleotide variants (SNVs), multinucleotide variants (MNVs),...Bioinformatician stuck in wet-lab
By Rahul Agarwal 3901 days ago Comments (1)biomickwatson.wordpress.com - This guide is aimed at pet bioinformaticians, and is meant to guide them towards better career development. 1. Make friends with local bioinformatics groups 2. Talk to your computing group 3. Obtain clear expectations 4. Rewrite your job...
