Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6)
Problem :
The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG...
github.com - Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop...
VECTOR CONTROL RESEARCH CENTRE
(Indian Council of Medical Research)
Indira Nagar Medical Complex
Puducherry-605006
WALK-IN-INTERVIEW
The following vacancies shall be filled purely on adhoc basis under Non-Institutional adhoc project...
github.com - An interactive data analysis tool for selection, aggregation and visualization of metagenomic data is presented. Functional analysis with a SEED hierarchy and pathway diagram based on KEGG orthology based upon MG-RAST annotation results is...
Roslin Bioinformatics Group
The Law group provides internal Institute-specific development, training and support roles for data manipulation, sequence analysis and any other aspect of the analysis of biological data using computer systems....
Meaningful analysis of next-generation sequencing (NGS) data, which are produced extensively by genetics and genomics studies, relies crucially on the accurate calling of SNPs and genotypes. Recently developed statistical methods both improve and...
Institution/Company:
University of Calgary
Location:
Calgary, AB
Job Description:
Novel diagnostic platform for detection of Osteoarthritis
I invite applications from highly motivated individuals to join my laboratory as a PhD student...
github.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...
Job Description: three postdoc positions in computational biology are available at the Center for Genomic Science in Milan (Italy):
- Development of computational methods to investigate the interplay between epigenetic and genetic layers and...
github.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...